RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 C10orf111Q8N326 155 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 KIF2BQ8N4N8 673 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 ADCY4Q8NFM4 1077 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 OR9A2Q8NGT5 310 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 OR51Q1Q8NH59 317 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 FBXO30Q8TB52 745 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 PNPT1Q8TCS8 783 aaKnown RBP4.89□□□□□ -1.63
SPG11-220ENST00000559933 ANKRD9Q96BM1 317 aaPredicted RBP4.89□□□□□ -1.63
SPG11-220ENST00000559933 PPWD1Q96BP3 646 aaKnown RBP4.89□□□□□ -1.63
SPG11-220ENST00000559933 PPCDCQ96CD2 204 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 KLHL29Q96CT2 875 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 SPDL1Q96EA4 605 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 CNRIP1Q96F85 164 aaPredicted RBP4.89□□□□□ -1.63
SPG11-220ENST00000559933 MAGED4Q96JG8 741 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 DIRC2Q96SL1 478 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 TRIM4Q9C037 500 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 STRADBQ9C0K7 418 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 CHST8Q9H2A9 424 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 REEP4Q9H6H4 257 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 ZNF304Q9HCX3 659 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 SERHLQ9NQF3 203 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 MIEF1Q9NQG6 463 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 PFDN4Q9NQP4 134 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 LANCL2Q9NS86 450 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 C19orf73Q9NVV2 129 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 NMRK1Q9NWW6 199 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 LYARQ9NX58 379 aaKnown RBP4.89□□□□□ -1.63
SPG11-220ENST00000559933 SIRT5Q9NXA8 310 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 AHSPQ9NZD4 102 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 ZIM2Q9NZV7 527 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 TRPC4Q9UBN4 977 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 ATP6V1HQ9UI12 483 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 SERTAD3Q9UJW9 196 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 ADAM29Q9UKF5 820 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 UTS2RQ9UKP6 389 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 CES1P1Q9UKY3 287 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 USP22Q9UPT9 525 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 PCDHA9Q9Y5H5 950 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 CLDN16Q9Y5I7 305 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 MRPS18BQ9Y676 258 aaKnown RBP4.89□□□□□ -1.63
SPG11-220ENST00000559933 SLC22A7Q9Y694 548 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 FRYQ5TBA9 3013 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 CCDC88CQ9P219 2028 aa4.89□□□□□ -1.63
SPG11-220ENST00000559933 B4E171 279 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 TXNDC9O14530 226 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 MRASO14807 208 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 PDPK1O15530 556 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 PRKNO60260 465 aaPredicted RBP4.88□□□□□ -1.63
SPG11-220ENST00000559933 BRINP1O60477 761 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 SCN2BO60939 215 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 PDE5AO76074 875 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 BMP10O95393 424 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 FHP07954 510 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 SNRPB2P08579 225 aaKnown RBP4.88□□□□□ -1.63
SPG11-220ENST00000559933 RNH1P13489 461 aaKnown RBP4.88□□□□□ -1.63
SPG11-220ENST00000559933 HOXB9P17482 250 aaPredicted RBP4.88□□□□□ -1.63
SPG11-220ENST00000559933 PRPS1L1P21108 318 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 F8A1P23610 371 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 SLC5A2P31639 672 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 S100A3P33764 101 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 TSPAN7P41732 249 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 ASMTP46597 345 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 MRPL19P49406 292 aaKnown RBP4.88□□□□□ -1.63
SPG11-220ENST00000559933 NCBP2P52298 156 aaKnown RBP eCLIP4.88□□□□□ -1.63
SPG11-220ENST00000559933 CLNS1AP54105 237 aaKnown RBP4.88□□□□□ -1.63
SPG11-220ENST00000559933 KCNK10P57789 538 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 MTPNP58546 118 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 NCALDP61601 193 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 TRA2BP62995 288 aaKnown RBP4.88□□□□□ -1.63
SPG11-220ENST00000559933 MRPS35P82673 323 aaKnown RBP4.88□□□□□ -1.63
SPG11-220ENST00000559933 RHAGQ02094 409 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 TGM3Q08188 693 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 BNIP1Q12981 228 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 DUSP8Q13202 625 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 NFYCQ13952 458 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 FAM53BQ14153 422 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 TGIF1Q15583 401 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 ZSCAN26Q16670 478 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 SMU1Q2TAY7 513 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 RABL3Q5HYI8 236 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 DCAF12Q5T6F0 453 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 CPTPQ5TA50 214 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 ATP1A1-AS1Q5TC04 95 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 GARNL3Q5VVW2 1013 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 METTL21CQ5VZV1 264 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 OR52E8Q6IFG1 317 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 FAM111BQ6SJ93 734 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 TMEM107Q6UX40 140 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 IKBIPQ70UQ0 350 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 OLIG3Q7RTU3 272 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 SZRD1Q7Z422 152 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 VASH2Q86V25 355 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 TMPRSS12Q86WS5 348 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 SCUBE1Q8IWY4 988 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 DSELQ8IZU8 1212 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 ZNF321PQ8N8H1 164 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 RBM15BQ8NDT2 890 aaKnown RBP4.88□□□□□ -1.63
SPG11-220ENST00000559933 SRFBP1Q8NEF9 429 aaKnown RBP4.88□□□□□ -1.63
SPG11-220ENST00000559933 OR4A15Q8NGL6 344 aa4.88□□□□□ -1.63
SPG11-220ENST00000559933 WDR36Q8NI36 951 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms