RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 GPATCH1Q9BRR8 931 aaKnown RBP9.75□□□□□ -0.85
TPM1-221ENST00000559831 THTPAQ9BU02 230 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 THUMPD3Q9BV44 507 aaKnown RBP9.75□□□□□ -0.85
TPM1-221ENST00000559831 SCNM1Q9BWG6 230 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 TRIM4Q9C037 500 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 C1orf21Q9H246 121 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 NANOGQ9H9S0 305 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 TPT1P8Q9HAU6 139 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 ADAP2Q9NPF8 381 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 ZCCHC3Q9NUD5 404 aaKnown RBP9.75□□□□□ -0.85
TPM1-221ENST00000559831 DDX18Q9NVP1 670 aaKnown RBP9.75□□□□□ -0.85
TPM1-221ENST00000559831 C19orf25Q9UFG5 118 aaPredicted RBP9.75□□□□□ -0.85
TPM1-221ENST00000559831 BCAP29Q9UHQ4 241 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 PACSIN3Q9UKS6 424 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 ERVK-19Q9WJR5 959 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 FARSAQ9Y285 508 aaKnown RBP9.75□□□□□ -0.85
TPM1-221ENST00000559831 NEUROG3Q9Y4Z2 214 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 CLCA3PQ9Y6N3 262 aa9.75□□□□□ -0.85
TPM1-221ENST00000559831 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.75□□□□□ -0.85
TPM1-221ENST00000559831 DMXL1Q9Y485 3027 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 AHCTF1Q8WYP5 2266 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 C21orf140B9A014 251 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 ANKRD65E5RJM6 399 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 HRKO00198 91 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 NME4O00746 187 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 GSC2O15499 205 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 DYRK3O43781 588 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 NME6O75414 186 aaPredicted RBP9.74□□□□□ -0.85
TPM1-221ENST00000559831 KLF7O75840 302 aaPredicted RBP9.74□□□□□ -0.85
TPM1-221ENST00000559831 DNAJC8O75937 253 aaPredicted RBP9.74□□□□□ -0.85
TPM1-221ENST00000559831 DXOO77932 396 aaKnown RBP9.74□□□□□ -0.85
TPM1-221ENST00000559831 SLITRK5O94991 958 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 KRT75O95678 551 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 IGHEP01854 428 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 UMODP07911 640 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 PPIBP23284 216 aaKnown RBP9.74□□□□□ -0.85
TPM1-221ENST00000559831 OTX2P32243 289 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 PGM1P36871 562 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 RPS26P62854 115 aaKnown RBP9.74□□□□□ -0.85
TPM1-221ENST00000559831 PRR5P85299 388 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 MGAT2Q10469 447 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 ELAVL1Q15717 326 aaKnown RBP9.74□□□□□ -0.85
TPM1-221ENST00000559831 TRMT12Q53H54 448 aaKnown RBP9.74□□□□□ -0.85
TPM1-221ENST00000559831 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.74□□□□□ -0.85
TPM1-221ENST00000559831 CPZQ66K79 652 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 C8orf82Q6P1X6 216 aaPredicted RBP9.74□□□□□ -0.85
TPM1-221ENST00000559831 TMEM64Q6YI46 380 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 C6orf120Q7Z4R8 191 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 CPEB2Q7Z5Q1 589 aaKnown RBP9.74□□□□□ -0.85
TPM1-221ENST00000559831 RNF130Q86XS8 419 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 VWA5B2Q8N398 1253 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 SIMC1Q8NDZ2 872 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 C7orf57Q8NEG2 295 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 OR8J3Q8NGG0 315 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 OR14A16Q8NHC5 309 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 FBXO30Q8TB52 745 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 PTPMT1Q8WUK0 201 aaPredicted RBP9.74□□□□□ -0.85
TPM1-221ENST00000559831 NKD1Q969G9 470 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 TMEM125Q96AQ2 219 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 MOAP1Q96BY2 351 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 C8orf44Q96CB5 159 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 CLPTM1LQ96KA5 538 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 PHF12Q96QT6 1004 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 SH3GL1Q99961 368 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 MESP1Q9BRJ9 268 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 YIPF4Q9BSR8 244 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 CADM1Q9BY67 442 aaKnown RBP9.74□□□□□ -0.85
TPM1-221ENST00000559831 OR8D2Q9GZM6 311 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 RAD21L1Q9H4I0 556 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 IKZF5Q9H5V7 419 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 PIF1Q9H611 641 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 CXorf21Q9HAI6 301 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 SPAG4Q9NPE6 437 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 EQTNQ9NQ60 294 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 CMTM6Q9NX76 183 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 PTGFRNQ9P2B2 879 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 TCFL5Q9UL49 500 aa9.74□□□□□ -0.85
TPM1-221ENST00000559831 MRPS18BQ9Y676 258 aaKnown RBP9.74□□□□□ -0.85
TPM1-221ENST00000559831 A0A087WV62 115 aa9.73□□□□□ -0.85
TPM1-221ENST00000559831 SYNDIG1LA6NDD5 238 aa9.73□□□□□ -0.85
TPM1-221ENST00000559831 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.73□□□□□ -0.85
TPM1-221ENST00000559831 UPK1AO00322 258 aa9.73□□□□□ -0.85
TPM1-221ENST00000559831 PLOD2O00469 737 aa9.73□□□□□ -0.85
TPM1-221ENST00000559831 PDE5AO76074 875 aa9.73□□□□□ -0.85
TPM1-221ENST00000559831 SEC24DO94855 1032 aaPredicted RBP9.73□□□□□ -0.85
TPM1-221ENST00000559831 CBX7O95931 251 aa9.73□□□□□ -0.85
TPM1-221ENST00000559831 CYC1P08574 325 aa9.73□□□□□ -0.85
TPM1-221ENST00000559831 LIPCP11150 499 aa9.73□□□□□ -0.85
TPM1-221ENST00000559831 F8A1P23610 371 aa9.73□□□□□ -0.85
TPM1-221ENST00000559831 SSTR4P31391 388 aa9.73□□□□□ -0.85
TPM1-221ENST00000559831 GALNSP34059 522 aa9.73□□□□□ -0.85
TPM1-221ENST00000559831 SOX11P35716 441 aa9.73□□□□□ -0.85
TPM1-221ENST00000559831 CRATP43155 626 aa9.73□□□□□ -0.85
TPM1-221ENST00000559831 MAP4K2Q12851 820 aa9.73□□□□□ -0.85
TPM1-221ENST00000559831 ZNF155Q12901 538 aaPredicted RBP9.73□□□□□ -0.85
TPM1-221ENST00000559831 LASP1Q14847 261 aaKnown RBP9.73□□□□□ -0.85
TPM1-221ENST00000559831 TGIF1Q15583 401 aa9.73□□□□□ -0.85
TPM1-221ENST00000559831 CYP51A1Q16850 503 aa9.73□□□□□ -0.85
TPM1-221ENST00000559831 COX20Q5RI15 118 aa9.73□□□□□ -0.85
TPM1-221ENST00000559831 FHL5Q5TD97 284 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms