RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 A0A0U1RQK1 487 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 ZNF320A2RRD8 509 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 TRABD2BA6NFA1 517 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 EFCAB7A8K855 629 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 I3L1I5 382 aaPredicted RBP2.58□□□□□ -2
VPS13C-207ENST00000558919 K7ERI5 159 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 LYPD3O95274 346 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 UROSP10746 265 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 GLULP15104 373 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 FCARP24071 287 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 NDST1P52848 882 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 PRKCEQ02156 737 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 MSLNQ13421 630 aaPredicted RBP2.58□□□□□ -2
VPS13C-207ENST00000558919 ISXQ2M1V0 245 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 SHROOM1Q2M3G4 852 aaPredicted RBP2.58□□□□□ -2
VPS13C-207ENST00000558919 C9orf129Q5T035 196 aaKnown RBP2.58□□□□□ -2
VPS13C-207ENST00000558919 PRAMEF8Q5VWM4 474 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 RTL6Q6ICC9 239 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 GPR137CQ8N3F9 429 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 FBXW8Q8N3Y1 598 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 NAT8LQ8N9F0 302 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 RELL2Q8NC24 303 aaPredicted RBP2.58□□□□□ -2
VPS13C-207ENST00000558919 ZNF671Q8TAW3 534 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 RDH11Q8TC12 318 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 FAF2Q96CS3 445 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 CXorf58Q96LI9 332 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 MAPKAP1Q9BPZ7 522 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 FAM173AQ9BQD7 235 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 GPR174Q9BXC1 333 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 CACNG6Q9BXT2 260 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 ASB8Q9H765 288 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 DCTPP1Q9H773 170 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 ACOXLQ9NUZ1 547 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 DIMT1Q9UNQ2 313 aaKnown RBP2.58□□□□□ -2
VPS13C-207ENST00000558919 PLEKHA6Q9Y2H5 1048 aa2.58□□□□□ -2
VPS13C-207ENST00000558919 A8MX80 341 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 HDAC3O15379 428 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 DUSP14O95147 198 aaKnown RBP2.57□□□□□ -2
VPS13C-207ENST00000558919 SFTPBP07988 381 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 SERPINF2P08697 491 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 SBK2P0C263 348 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 LAMP1P11279 417 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 PVRP15151 417 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 MGMTP16455 207 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 PRKAR2BP31323 418 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 KLF5Q13887 457 aaPredicted RBP2.57□□□□□ -2
VPS13C-207ENST00000558919 GK2Q14410 553 aaPredicted RBP2.57□□□□□ -2
VPS13C-207ENST00000558919 SLC10A1Q14973 349 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 KRT31Q15323 416 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 PAN3Q58A45 887 aaKnown RBP2.57□□□□□ -2
VPS13C-207ENST00000558919 ARMC3Q5W041 872 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 TATDN1Q6P1N9 297 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 ASRGL1Q7L266 308 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 KCTD9Q7L273 389 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 PRSS42Q7Z5A4 293 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 KRT77Q7Z794 578 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 STHQ8IWL8 128 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 Q8N9G6 341 aaPredicted RBP2.57□□□□□ -2
VPS13C-207ENST00000558919 TFB1MQ8WVM0 346 aaKnown RBP2.57□□□□□ -2
VPS13C-207ENST00000558919 RAB3CQ96E17 227 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 MRPL53Q96EL3 112 aaKnown RBP2.57□□□□□ -2
VPS13C-207ENST00000558919 COG3Q96JB2 828 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 RPGRIP1Q96KN7 1286 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 C9orf85Q96MD7 179 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 OR5M11Q96RB7 305 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 FUNDC2Q9BWH2 189 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 AKIRIN1Q9H9L7 192 aaPredicted RBP2.57□□□□□ -2
VPS13C-207ENST00000558919 ADGRL4Q9HBW9 690 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 VPS54Q9P1Q0 977 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 PRODH2Q9UF12 536 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 PRO0461Q9UI25 63 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 MAD2L2Q9UI95 211 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 MOKQ9UQ07 419 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 MRPS2Q9Y399 296 aaKnown RBP2.57□□□□□ -2
VPS13C-207ENST00000558919 KLF2Q9Y5W3 355 aaPredicted RBP2.57□□□□□ -2
VPS13C-207ENST00000558919 KIF7Q2M1P5 1343 aa2.57□□□□□ -2
VPS13C-207ENST00000558919 IGKV6D-21A0A0A0MT36 114 aa2.56□□□□□ -2
VPS13C-207ENST00000558919 NPIPA5A0A0B4J1W7 369 aa2.56□□□□□ -2
VPS13C-207ENST00000558919 NPIPA5E9PKD4 350 aa2.56□□□□□ -2
VPS13C-207ENST00000558919 CYB561D2O14569 222 aa2.56□□□□□ -2
VPS13C-207ENST00000558919 CHEK1O14757 476 aa2.56□□□□□ -2
VPS13C-207ENST00000558919 ZNF263O14978 683 aa2.56□□□□□ -2
VPS13C-207ENST00000558919 RTL8CO15255 209 aa2.56□□□□□ -2
VPS13C-207ENST00000558919 SLC7A4O43246 635 aa2.56□□□□□ -2
VPS13C-207ENST00000558919 OAS1P00973 400 aaKnown RBP2.56□□□□□ -2
VPS13C-207ENST00000558919 KRT6AP02538 564 aa2.56□□□□□ -2
VPS13C-207ENST00000558919 KRT6BP04259 564 aa2.56□□□□□ -2
VPS13C-207ENST00000558919 IGFBP5P24593 272 aa2.56□□□□□ -2
VPS13C-207ENST00000558919 CTNNB1P35222 781 aa2.56□□□□□ -2
VPS13C-207ENST00000558919 KRT6CP48668 564 aa2.56□□□□□ -2
VPS13C-207ENST00000558919 ZNF131P52739 623 aa2.56□□□□□ -2
VPS13C-207ENST00000558919 GEMP55040 296 aa2.56□□□□□ -2
VPS13C-207ENST00000558919 RPS4XP62701 263 aaKnown RBP2.56□□□□□ -2
VPS13C-207ENST00000558919 EPC2Q52LR7 807 aa2.56□□□□□ -2
VPS13C-207ENST00000558919 C2orf83Q53S99 150 aa2.56□□□□□ -2
VPS13C-207ENST00000558919 MS4A13Q5J8X5 152 aa2.56□□□□□ -2
VPS13C-207ENST00000558919 GLRA4Q5JXX5 417 aa2.56□□□□□ -2
VPS13C-207ENST00000558919 CDC42EP5Q6NZY7 148 aa2.56□□□□□ -2
VPS13C-207ENST00000558919 PIWIL3Q7Z3Z3 882 aaKnown RBP2.56□□□□□ -2
VPS13C-207ENST00000558919 LUZP1Q86V48 1076 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms