RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 TP53TG5Q9Y2B4 290 aa16.22■□□□□ 0.19
TPM1-214ENST00000558544 EXPH5Q8NEV8 1989 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 K7EM74 188 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 MAN1A2O60476 641 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 ZFAND5O76080 213 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 CBX7O95931 251 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 PDGFAP04085 211 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 S1PR1P21453 382 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 IL12AP29459 219 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 MC3RP41968 323 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 ARFIP2P53365 341 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 MANFP55145 182 aaKnown RBP16.21■□□□□ 0.19
TPM1-214ENST00000558544 SLC37A1P57057 533 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 STX1BP61266 288 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 LY6DQ14210 128 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 SPANXN4Q5MJ08 99 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 OR4F3Q6IEY1 312 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 H3F3CQ6NXT2 135 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 TMEM107Q6UX40 140 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 LINC00696Q6ZRV3 163 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 CAMKMTQ7Z624 323 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 C9orf40Q8IXQ3 194 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 MIER2Q8N344 545 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 SLC5A8Q8N695 610 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 OR9I1Q8NGQ6 314 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 ZFP28Q8NHY6 868 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 C9orf43Q8TAL5 461 aaPredicted RBP16.21■□□□□ 0.19
TPM1-214ENST00000558544 TESCQ96BS2 214 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 SMAD5Q99717 465 aaKnown RBP16.21■□□□□ 0.19
TPM1-214ENST00000558544 OR10A5Q9H207 317 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 CDCP1Q9H5V8 836 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 LIN28AQ9H9Z2 209 aaKnown RBP16.21■□□□□ 0.19
TPM1-214ENST00000558544 ZBTB20Q9HC78 741 aaPredicted RBP16.21■□□□□ 0.19
TPM1-214ENST00000558544 SDR39U1Q9NRG7 319 aaPredicted RBP16.21■□□□□ 0.19
TPM1-214ENST00000558544 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.21■□□□□ 0.19
TPM1-214ENST00000558544 BCAP29Q9UHQ4 241 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 ZNF639Q9UID6 485 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 TUBD1Q9UJT1 453 aa16.21■□□□□ 0.19
TPM1-214ENST00000558544 A0A1W2PRB8 838 aa16.2■□□□□ 0.18
TPM1-214ENST00000558544 ALPPP05187 535 aa16.2■□□□□ 0.18
TPM1-214ENST00000558544 GPC1P35052 558 aa16.2■□□□□ 0.18
TPM1-214ENST00000558544 KIR3DL1P43629 444 aa16.2■□□□□ 0.18
TPM1-214ENST00000558544 CDK9P50750 372 aaKnown RBP16.2■□□□□ 0.18
TPM1-214ENST00000558544 RNF4P78317 190 aa16.2■□□□□ 0.18
TPM1-214ENST00000558544 DUSP8Q13202 625 aa16.2■□□□□ 0.18
TPM1-214ENST00000558544 DPY19L1Q2PZI1 675 aa16.2■□□□□ 0.18
TPM1-214ENST00000558544 FAM174BQ3ZCQ3 159 aa16.2■□□□□ 0.18
TPM1-214ENST00000558544 TCTN3Q6NUS6 607 aa16.2■□□□□ 0.18
TPM1-214ENST00000558544 PAOXQ6QHF9 649 aa16.2■□□□□ 0.18
TPM1-214ENST00000558544 ISLR2Q6UXK2 745 aa16.2■□□□□ 0.18
TPM1-214ENST00000558544 ZNF615Q8N8J6 731 aa16.2■□□□□ 0.18
TPM1-214ENST00000558544 OR7G2Q8NG99 324 aa16.2■□□□□ 0.18
TPM1-214ENST00000558544 OR7G1Q8NGA0 311 aa16.2■□□□□ 0.18
TPM1-214ENST00000558544 OR52R1Q8NGF1 315 aa16.2■□□□□ 0.18
TPM1-214ENST00000558544 OR8J2Q8NGG1 315 aa16.2■□□□□ 0.18
TPM1-214ENST00000558544 ZNF354BQ96LW1 612 aa16.2■□□□□ 0.18
TPM1-214ENST00000558544 GAL3ST4Q96RP7 486 aa16.2■□□□□ 0.18
TPM1-214ENST00000558544 UBL7Q96S82 380 aaPredicted RBP16.2■□□□□ 0.18
TPM1-214ENST00000558544 ZBTB18Q99592 522 aa16.2■□□□□ 0.18
TPM1-214ENST00000558544 FAM107BQ9H098 131 aa16.2■□□□□ 0.18
TPM1-214ENST00000558544 ZNF71Q9NQZ8 489 aaPredicted RBP16.2■□□□□ 0.18
TPM1-214ENST00000558544 ACSS1Q9NUB1 689 aaPredicted RBP16.2■□□□□ 0.18
TPM1-214ENST00000558544 ZIM2Q9NZV7 527 aa16.2■□□□□ 0.18
TPM1-214ENST00000558544 KLHL14Q9P2G3 628 aa16.2■□□□□ 0.18
TPM1-214ENST00000558544 COPG1Q9Y678 874 aaKnown RBP16.2■□□□□ 0.18
TPM1-214ENST00000558544 SPENQ96T58 3664 aaKnown RBP16.19■□□□□ 0.18
TPM1-214ENST00000558544 ATRXP46100 2492 aa16.19■□□□□ 0.18
TPM1-214ENST00000558544 SLC22A3O75751 556 aa16.19■□□□□ 0.18
TPM1-214ENST00000558544 C6orf47O95873 294 aa16.19■□□□□ 0.18
TPM1-214ENST00000558544 NCF2P19878 526 aaPredicted RBP16.19■□□□□ 0.18
TPM1-214ENST00000558544 ST13P50502 369 aaKnown RBP16.19■□□□□ 0.18
TPM1-214ENST00000558544 WNT3P56703 355 aa16.19■□□□□ 0.18
TPM1-214ENST00000558544 SRSF11Q05519 484 aaKnown RBP16.19■□□□□ 0.18
TPM1-214ENST00000558544 MFAP5Q13361 173 aa16.19■□□□□ 0.18
TPM1-214ENST00000558544 EBPQ15125 230 aaKnown RBP16.19■□□□□ 0.18
TPM1-214ENST00000558544 MEP1AQ16819 746 aa16.19■□□□□ 0.18
TPM1-214ENST00000558544 LACTB2Q53H82 288 aaPredicted RBP16.19■□□□□ 0.18
TPM1-214ENST00000558544 ACER2Q5QJU3 275 aa16.19■□□□□ 0.18
TPM1-214ENST00000558544 FHL5Q5TD97 284 aa16.19■□□□□ 0.18
TPM1-214ENST00000558544 ABHD17BQ5VST6 288 aa16.19■□□□□ 0.18
TPM1-214ENST00000558544 C16orf47Q6ZP98 133 aaPredicted RBP16.19■□□□□ 0.18
TPM1-214ENST00000558544 SLC29A4Q7RTT9 530 aa16.19■□□□□ 0.18
TPM1-214ENST00000558544 RPS19BP1Q86WX3 136 aaKnown RBP16.19■□□□□ 0.18
TPM1-214ENST00000558544 NATD1Q8N6N6 113 aa16.19■□□□□ 0.18
TPM1-214ENST00000558544 OR8K3Q8NH51 312 aa16.19■□□□□ 0.18
TPM1-214ENST00000558544 C10orf82Q8WW14 230 aa16.19■□□□□ 0.18
TPM1-214ENST00000558544 MAGED4Q96JG8 741 aa16.19■□□□□ 0.18
TPM1-214ENST00000558544 NSRP1Q9H0G5 558 aaKnown RBP16.19■□□□□ 0.18
TPM1-214ENST00000558544 TEKT2Q9UIF3 430 aa16.19■□□□□ 0.18
TPM1-214ENST00000558544 TRIM33Q9UPN9 1127 aa16.19■□□□□ 0.18
TPM1-214ENST00000558544 ZFYVE26Q68DK2 2539 aa16.19■□□□□ 0.18
TPM1-214ENST00000558544 TMEM200CA6NKL6 621 aa16.18■□□□□ 0.18
TPM1-214ENST00000558544 OR6C76A6NM76 312 aa16.18■□□□□ 0.18
TPM1-214ENST00000558544 PRAMEF2O60811 474 aa16.18■□□□□ 0.18
TPM1-214ENST00000558544 SLITRK5O94991 958 aa16.18■□□□□ 0.18
TPM1-214ENST00000558544 F10P00742 488 aa16.18■□□□□ 0.18
TPM1-214ENST00000558544 ABCB1P08183 1280 aaPredicted RBP16.18■□□□□ 0.18
TPM1-214ENST00000558544 GPX3P22352 226 aa16.18■□□□□ 0.18
TPM1-214ENST00000558544 S100A3P33764 101 aa16.18■□□□□ 0.18
TPM1-214ENST00000558544 ZFP36L2P47974 494 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms