RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 GPR143P51810 404 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 IGLV3-21P80748 117 aaPredicted RBP8.06□□□□□ -1.12
USP3-208ENST00000558285 FOLH1Q04609 750 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 MPEG1Q2M385 716 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 NDUFAF5Q5TEU4 345 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 ZNF793Q6ZN11 406 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 RTL4Q6ZR62 310 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 GK5Q6ZS86 529 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 UBE3DQ7Z6J8 389 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 GALNT12Q8IXK2 581 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 GOLM1Q8NBJ4 401 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 CATSPER1Q8NEC5 780 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 NFAM1Q8NET5 270 aaPredicted RBP8.06□□□□□ -1.12
USP3-208ENST00000558285 OR7G1Q8NGA0 311 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 SLC2A12Q8TD20 617 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 LRRC8CQ8TDW0 803 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 EPS8L3Q8TE67 593 aaKnown RBP8.06□□□□□ -1.12
USP3-208ENST00000558285 ERP27Q96DN0 273 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 CSF3RQ99062 836 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 CNPPD1Q9BV87 410 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 TRIM45Q9H8W5 580 aaPredicted RBP8.06□□□□□ -1.12
USP3-208ENST00000558285 ZBTB20Q9HC78 741 aaPredicted RBP8.06□□□□□ -1.12
USP3-208ENST00000558285 OXSMQ9NWU1 459 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 PTTG2Q9NZH5 202 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 MYOTQ9UBF9 498 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 LGALS13Q9UHV8 139 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 MGAQ8IWI9 3026 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 WDFY3Q8IZQ1 3526 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 OR2W5A6NFC9 320 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 LRRC14BA6NHZ5 514 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 NME2P1O60361 137 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 AIFM1O95831 613 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 PDYNP01213 254 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 PROCP04070 461 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 CELA2AP08217 269 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 UROSP10746 265 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 PORP16435 677 aaPredicted RBP8.06□□□□□ -1.12
USP3-208ENST00000558285 NME2P22392 152 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 NAGLUP54802 743 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 RNF4P78317 190 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 MRPS22P82650 360 aaKnown RBP8.06□□□□□ -1.12
USP3-208ENST00000558285 LIN52Q52LA3 116 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 UNC50Q53HI1 259 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 TBCELQ5QJ74 424 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 MRM1Q6IN84 353 aaKnown RBP8.06□□□□□ -1.12
USP3-208ENST00000558285 ADNP2Q6IQ32 1131 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 LETMD1Q6P1Q0 360 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 FRMD7Q6ZUT3 714 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 COMMD6Q7Z4G1 85 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 SSC4DQ8WTU2 575 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 THAP3Q8WTV1 239 aaPredicted RBP8.06□□□□□ -1.12
USP3-208ENST00000558285 SCMH1Q96GD3 660 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 NSUN5Q96P11 429 aaKnown RBP8.06□□□□□ -1.12
USP3-208ENST00000558285 BARD1Q99728 777 aaKnown RBP8.06□□□□□ -1.12
USP3-208ENST00000558285 RUBCNLQ9H714 662 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 ZBTB26Q9HCK0 441 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 HHATLQ9HCP6 504 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 MIEF1Q9NQG6 463 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 KLHL1Q9NR64 748 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 EHD3Q9NZN3 535 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 B4GALT7Q9UBV7 327 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 PRODH2Q9UF12 536 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 ATG4BQ9Y4P1 393 aa8.06□□□□□ -1.12
USP3-208ENST00000558285 A0A1W2PPM1 405 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 SERTM1A2A2V5 107 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 C4orf51C9J302 202 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 TFECO14948 347 aaPredicted RBP8.05□□□□□ -1.12
USP3-208ENST00000558285 PCDH7O60245 1069 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 FGF17O60258 216 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 RSL1D1O76021 490 aaKnown RBP8.05□□□□□ -1.12
USP3-208ENST00000558285 CBX6O95503 412 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 TBX6O95947 436 aaPredicted RBP8.05□□□□□ -1.12
USP3-208ENST00000558285 SHBGP04278 402 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 CPMP14384 443 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 PCSK2P16519 638 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 NT5EP21589 574 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 MPIP34949 423 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 RPL3P39023 403 aaKnown RBP8.05□□□□□ -1.12
USP3-208ENST00000558285 ALDH9A1P49189 494 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 XKP51811 444 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 DCAF7P61962 342 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 PLGLB1Q02325 96 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 SLC18A2Q05940 514 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 ZNF267Q14586 743 aaPredicted RBP8.05□□□□□ -1.12
USP3-208ENST00000558285 OCLNQ16625 522 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 UBAP2Q5T6F2 1119 aaKnown RBP8.05□□□□□ -1.12
USP3-208ENST00000558285 FOXB2Q5VYV0 432 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 FCRLBQ6BAA4 426 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 NCCRP1Q6ZVX7 275 aaPredicted RBP8.05□□□□□ -1.12
USP3-208ENST00000558285 IKBIPQ70UQ0 350 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 SLC22A16Q86VW1 577 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 C4orf33Q8N1A6 199 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 GHDCQ8N2G8 530 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 C1orf52Q8N6N3 182 aaKnown RBP8.05□□□□□ -1.12
USP3-208ENST00000558285 APCDD1LQ8NCL9 501 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 MDS2Q8NDY4 140 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 OR2W6PQ8NHA6 318 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 MZB1Q8WU39 189 aa8.05□□□□□ -1.12
USP3-208ENST00000558285 PTPMT1Q8WUK0 201 aaPredicted RBP8.05□□□□□ -1.12
USP3-208ENST00000558285 WDR60Q8WVS4 1066 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms