RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 BCL6P41182 706 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 AVPR1BP47901 424 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 CCR8P51685 355 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 EMP2P54851 167 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 EMP3P54852 163 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 DIO3P55073 304 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 TRAP1Q12931 704 aaKnown RBP11.68□□□□□ -0.54
SHMT2-230ENST00000557427 MAD2L1Q13257 205 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-230ENST00000557427 RCAN2Q14206 197 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 FLOT2Q14254 428 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 NDUFA9Q16795 377 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 SAMD4BQ5PRF9 694 aaKnown RBP11.68□□□□□ -0.54
SHMT2-230ENST00000557427 CATSPEREQ5SY80 951 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 GARNL3Q5VVW2 1013 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 ATG9BQ674R7 924 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 ZFP1Q6P2D0 407 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 TRIM46Q7Z4K8 759 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 VN1R4Q7Z5H5 301 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 KBTBD2Q8IY47 623 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 OR9A4Q8NGU2 314 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 OR56A3Q8NH54 315 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 SLC13A3Q8WWT9 602 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 ASB9Q96DX5 294 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 OR4K3Q96R72 315 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 GPATCH1Q9BRR8 931 aaKnown RBP11.68□□□□□ -0.54
SHMT2-230ENST00000557427 GID8Q9NWU2 228 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 ASIC5Q9NY37 505 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 TMEM181Q9P2C4 612 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 ST6GALNAC2Q9UJ37 374 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 NXT1Q9UKK6 140 aaKnown RBP11.68□□□□□ -0.54
SHMT2-230ENST00000557427 SLC22A14Q9Y267 594 aa11.68□□□□□ -0.54
SHMT2-230ENST00000557427 A0A1W2PP18 115 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 SERTM1A2A2V5 107 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 FAM234BA2RU67 622 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 MANBAO00462 879 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 ACOT8O14734 319 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 PROM1O43490 865 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 SLC22A3O75751 556 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 KRT6AP02538 564 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 KRT6BP04259 564 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 HEXBP07686 556 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 PCSK2P16519 638 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 EPORP19235 508 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 GDF5P43026 501 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 ZFP36L2P47974 494 aaKnown RBP11.67□□□□□ -0.54
SHMT2-230ENST00000557427 KRT6CP48668 564 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 SESN3P58005 492 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 ZNF33BQ06732 778 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 DSG2Q14126 1118 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 ABRAXAS2Q15018 415 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 PCOLCEQ15113 449 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 TAF11Q15544 211 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 SCIMPQ6UWF3 145 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 FGD2Q7Z6J4 655 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 DHDDSQ86SQ9 333 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 ASPGQ86U10 573 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 RETREG3Q86VR2 466 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 THOC6Q86W42 341 aaKnown RBP11.67□□□□□ -0.54
SHMT2-230ENST00000557427 SHISA5Q8N114 240 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 AMER3Q8N944 861 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 SNX31Q8N9S9 440 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 L3MBTL4Q8NA19 623 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 FNDC5Q8NAU1 212 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 MFSD9Q8NBP5 474 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 KCT2Q8NC54 265 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 CAMKVQ8NCB2 501 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 WFDC11Q8NEX6 87 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 ZCCHC10Q8TBK6 192 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 SLC5A11Q8WWX8 675 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 SPDL1Q96EA4 605 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 THAP11Q96EK4 314 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 UCK2Q9BZX2 261 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 NMRK1Q9NWW6 199 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 ADA2Q9NZK5 511 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 ABCD2Q9UBJ2 740 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 CD300AQ9UGN4 299 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 DYRK1BQ9Y463 629 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 HEATR5BQ9P2D3 2071 aa11.67□□□□□ -0.54
SHMT2-230ENST00000557427 E9PLN8 166 aa11.66□□□□□ -0.54
SHMT2-230ENST00000557427 NPIPB8E9PQR5 432 aa11.66□□□□□ -0.54
SHMT2-230ENST00000557427 H3BNX3 289 aa11.66□□□□□ -0.54
SHMT2-230ENST00000557427 SGK494L7N484 410 aa11.66□□□□□ -0.54
SHMT2-230ENST00000557427 UGDHO60701 494 aa11.66□□□□□ -0.54
SHMT2-230ENST00000557427 ULK1O75385 1050 aa11.66□□□□□ -0.54
SHMT2-230ENST00000557427 EEDO75530 441 aaKnown RBP11.66□□□□□ -0.54
SHMT2-230ENST00000557427 TOXO94900 526 aa11.66□□□□□ -0.54
SHMT2-230ENST00000557427 NPPAP01160 153 aa11.66□□□□□ -0.54
SHMT2-230ENST00000557427 SERPINA7P05543 415 aa11.66□□□□□ -0.54
SHMT2-230ENST00000557427 COX6A1P12074 109 aa11.66□□□□□ -0.54
SHMT2-230ENST00000557427 ACADSP16219 412 aa11.66□□□□□ -0.54
SHMT2-230ENST00000557427 IL1RNP18510 177 aa11.66□□□□□ -0.54
SHMT2-230ENST00000557427 PRPH2P23942 346 aa11.66□□□□□ -0.54
SHMT2-230ENST00000557427 CXCR2P25025 360 aa11.66□□□□□ -0.54
SHMT2-230ENST00000557427 MSX1P28360 303 aa11.66□□□□□ -0.54
SHMT2-230ENST00000557427 MEOX1P50221 254 aa11.66□□□□□ -0.54
SHMT2-230ENST00000557427 POLR2JP52435 117 aaKnown RBP11.66□□□□□ -0.54
SHMT2-230ENST00000557427 HSF1Q00613 529 aa11.66□□□□□ -0.54
SHMT2-230ENST00000557427 MS4A2Q01362 244 aa11.66□□□□□ -0.54
SHMT2-230ENST00000557427 FAM53BQ14153 422 aa11.66□□□□□ -0.54
SHMT2-230ENST00000557427 TRIM25Q14258 630 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms