RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 CD1CP29017 333 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 PTGER4P35408 488 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 ZNF131P52739 623 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 CRIP2P52943 208 aaPredicted RBP3.47□□□□□ -1.85
CHD8-212ENST00000557329 LIMK2P53671 638 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 PFN3P60673 137 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 RPS18P62269 152 aaKnown RBP3.47□□□□□ -1.85
CHD8-212ENST00000557329 RPS15P62841 145 aaKnown RBP3.47□□□□□ -1.85
CHD8-212ENST00000557329 TLE4Q04727 773 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 CYP24A1Q07973 514 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 CDC16Q13042 620 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 PSMD6Q15008 389 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 GOLGA7BQ2TAP0 167 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 TMEM30BQ3MIR4 351 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 RAB6CQ53S08 254 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 FAM133BQ5BKY9 247 aaKnown RBP3.47□□□□□ -1.85
CHD8-212ENST00000557329 MPP7Q5T2T1 576 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 NSUN5P2Q63ZY6 315 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 ZNF449Q6P9G9 518 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 SPNS3Q6ZMD2 512 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 MACC1Q6ZN28 852 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 Q75L30 129 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 UNC93AQ86WB7 457 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 CCAR2Q8N163 923 aaKnown RBP3.47□□□□□ -1.85
CHD8-212ENST00000557329 CRYBG2Q8N1P7 616 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 XXYLT1Q8NBI6 393 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 FDCSPQ8NFU4 85 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 CCL4L1Q8NHW4 92 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 LGALS12Q96DT0 336 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 EGLN2Q96KS0 407 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 PRICKLE1Q96MT3 831 aaPredicted RBP3.47□□□□□ -1.85
CHD8-212ENST00000557329 CMTM3Q96MX0 182 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 RAB6CQ9H0N0 254 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 PIGMQ9H3S5 423 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 AMACRQ9UHK6 382 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 FADS3Q9Y5Q0 445 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 TRPM6Q9BX84 2022 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 CELSR1Q9NYQ6 3014 aa3.47□□□□□ -1.85
CHD8-212ENST00000557329 DIDO1Q9BTC0 2240 aaKnown RBP3.46□□□□□ -1.86
CHD8-212ENST00000557329 SCN8AQ9UQD0 1980 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 TMEM110-MUSTN1A8MSY1 372 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 A8MX80 341 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 SMIM1B2RUZ4 78 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 CACNB4O00305 520 aaPredicted RBP3.46□□□□□ -1.86
CHD8-212ENST00000557329 CCL21O00585 134 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 ALOX15BO15296 676 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 NUDT21O43809 227 aaKnown RBP3.46□□□□□ -1.86
CHD8-212ENST00000557329 GPR137BO60478 399 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 SNAP91O60641 907 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 SORBS2O94875 1100 aaKnown RBP3.46□□□□□ -1.86
CHD8-212ENST00000557329 BMP10O95393 424 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 ASS1P00966 412 aaKnown RBP3.46□□□□□ -1.86
CHD8-212ENST00000557329 CGAP01215 116 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 RHOCP08134 193 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 PLEKP08567 350 aaPredicted RBP3.46□□□□□ -1.86
CHD8-212ENST00000557329 ANXA7P20073 488 aaKnown RBP3.46□□□□□ -1.86
CHD8-212ENST00000557329 CAPN3P20807 821 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 ITGA3P26006 1051 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 PRPHP41219 470 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 ERVK11-1P61568 191 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 KCNJ10P78508 379 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 CEBPZQ03701 1054 aaKnown RBP3.46□□□□□ -1.86
CHD8-212ENST00000557329 NFATC2Q13469 925 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 TRA2AQ13595 282 aaKnown RBP eCLIP3.46□□□□□ -1.86
CHD8-212ENST00000557329 MEP1AQ16819 746 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 KRTAP27-1Q3LI81 207 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 RABGAP1LQ5R372 815 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 HYIQ5T013 277 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 CFAP58Q5T655 872 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 TMEM198Q66K66 360 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 HIST2H2BDQ6DRA6 164 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 FAM199XQ6PEV8 388 aaPredicted RBP3.46□□□□□ -1.86
CHD8-212ENST00000557329 LEKR1Q6ZMV7 388 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 PHLDB2Q86SQ0 1253 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 CCDC65Q8IXS2 484 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 STPG4Q8N801 248 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 ATP6V0D2Q8N8Y2 350 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 CHDHQ8NE62 594 aaPredicted RBP3.46□□□□□ -1.86
CHD8-212ENST00000557329 OR4D9Q8NGE8 314 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 OR2A12Q8NGT7 310 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 OR10G6Q8NH81 332 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 GSDMBQ8TAX9 411 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 SLC44A1Q8WWI5 657 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 PATE1Q8WXA2 126 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 PNPLA2Q96AD5 504 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 PDXPQ96GD0 296 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 CNDP1Q96KN2 507 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 ZNF354BQ96LW1 612 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 OR2A14Q96R47 310 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 OR6C1Q96RD1 312 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 ASCL2Q99929 193 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 SMR3AQ99954 134 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 TREX2Q9BQ50 279 aaPredicted RBP3.46□□□□□ -1.86
CHD8-212ENST00000557329 FEM1AQ9BSK4 669 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 APOOQ9BUR5 198 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 NUDT9Q9BW91 350 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 FGFBP2Q9BYJ0 223 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 TM6SF2Q9BZW4 377 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 ST6GALNAC4Q9H4F1 302 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 RAD21L1Q9H4I0 556 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms