RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 NME2P1O60361 137 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 SKAP2O75563 359 aaPredicted RBP9.89□□□□□ -0.83
LINC00239-201ENST00000556973 ATP6AP2O75787 350 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 OR6B1O95007 311 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 CBX6O95503 412 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 EDN3P14138 238 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 SDC1P18827 310 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 NME2P22392 152 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 TACR1P25103 407 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 MAPK1P28482 360 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 SOX3P41225 446 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 ASMTP46597 345 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 RPL38P63173 70 aaKnown RBP9.89□□□□□ -0.83
LINC00239-201ENST00000556973 DUSP2Q05923 314 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 BST1Q10588 318 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 MAD2L1Q13257 205 aaPredicted RBP9.89□□□□□ -0.83
LINC00239-201ENST00000556973 EBPQ15125 230 aaKnown RBP9.89□□□□□ -0.83
LINC00239-201ENST00000556973 SMU1Q2TAY7 513 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 TRMT12Q53H54 448 aaKnown RBP9.89□□□□□ -0.83
LINC00239-201ENST00000556973 C6orf136Q5SQH8 315 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 HLA-DQA1Q5Y7H0 255 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 ATG16L1Q676U5 607 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 ZNF324BQ6AW86 544 aaPredicted RBP9.89□□□□□ -0.83
LINC00239-201ENST00000556973 FAM111BQ6SJ93 734 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 GALNTL5Q7Z4T8 443 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 DND1Q8IYX4 353 aaKnown RBP9.89□□□□□ -0.83
LINC00239-201ENST00000556973 TAGAPQ8N103 731 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 ADCY4Q8NFM4 1077 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 ZNF675Q8TD23 568 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 MGARPQ8TDB4 240 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 TUBGCP3Q96CW5 907 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 ERP27Q96DN0 273 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 MTERF3Q96E29 417 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 ATP6V1G3Q96LB4 118 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 SGCZQ96LD1 299 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 C3orf30Q96M34 536 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 TAAR6Q96RI8 345 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 BBS4Q96RK4 519 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 SORT1Q99523 831 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 SH3GL2Q99962 352 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 HES7Q9BYE0 225 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 REEP4Q9H6H4 257 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 MANSC1Q9H8J5 431 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 TIMMDC1Q9NPL8 285 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 OLAHQ9NV23 265 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 THAP1Q9NVV9 213 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 BCAP29Q9UHQ4 241 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 BAIAP2L1Q9UHR4 511 aa9.89□□□□□ -0.83
LINC00239-201ENST00000556973 KLF13Q9Y2Y9 288 aaPredicted RBP9.89□□□□□ -0.83
LINC00239-201ENST00000556973 TLN1Q9Y490 2541 aaKnown RBP9.88□□□□□ -0.83
LINC00239-201ENST00000556973 ASPDHA6ND91 283 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 CAPN14A8MX76 684 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 HMGB1P1B2RPK0 211 aaPredicted RBP9.88□□□□□ -0.83
LINC00239-201ENST00000556973 ZNF354AO60765 605 aaPredicted RBP9.88□□□□□ -0.83
LINC00239-201ENST00000556973 TBX19O60806 448 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 SLITRK5O94991 958 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 PRPS2P11908 318 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 BCKDHAP12694 445 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 DDX5P17844 614 aaKnown RBP9.88□□□□□ -0.83
LINC00239-201ENST00000556973 CNR1P21554 472 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 GNLYP22749 145 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 SOX18P35713 384 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 NR0B1P51843 470 aaKnown RBP9.88□□□□□ -0.83
LINC00239-201ENST00000556973 DCAF7P61962 342 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 PRSS53Q2L4Q9 553 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 ZNF791Q3KP31 576 aaPredicted RBP9.88□□□□□ -0.83
LINC00239-201ENST00000556973 ZNF628Q5EBL2 1059 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 RTL4Q6ZR62 310 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 MDGA2Q7Z553 956 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.88□□□□□ -0.83
LINC00239-201ENST00000556973 SULF2Q8IWU5 870 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 FAM9CQ8IZT9 166 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 ZNF441Q8N8Z8 693 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 FNDC5Q8NAU1 212 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 GOLM1Q8NBJ4 401 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 POGLUT1Q8NBL1 392 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 ST6GALNAC3Q8NDV1 305 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 C17orf47Q8NEP4 570 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 OR52R1Q8NGF1 315 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 C16orf52Q8NHV5 167 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 NR4A3Q92570 626 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 ADIPOR1Q96A54 375 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 ZNF764Q96H86 408 aaPredicted RBP9.88□□□□□ -0.83
LINC00239-201ENST00000556973 TSSK3Q96PN8 268 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 GAL3ST4Q96RP7 486 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 CLMPQ9H6B4 373 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 PRODH2Q9UF12 536 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 EIF3LQ9Y262 564 aaKnown RBP9.88□□□□□ -0.83
LINC00239-201ENST00000556973 SHANK1Q9Y566 2161 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 EML6Q6ZMW3 1958 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 CFAP46Q8IYW2 2715 aa9.88□□□□□ -0.83
LINC00239-201ENST00000556973 SLCO1B7G3V0H7 640 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 KLF11O14901 512 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 PEX1O43933 1283 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 PLOD3O60568 738 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 SNNO75324 88 aaPredicted RBP9.87□□□□□ -0.83
LINC00239-201ENST00000556973 NADKO95544 446 aaPredicted RBP9.87□□□□□ -0.83
LINC00239-201ENST00000556973 CBX7O95931 251 aa9.87□□□□□ -0.83
LINC00239-201ENST00000556973 JUNP05412 331 aaKnown RBP9.87□□□□□ -0.83
LINC00239-201ENST00000556973 PCSK2P16519 638 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms