RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 GNB5O14775 395 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 CCNT2O60583 730 aaKnown RBP8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 PIAS1O75925 651 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 RCBTB2O95199 551 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 WISP3O95389 354 aaPredicted RBP8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 GPR75O95800 540 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 ACTL6AO96019 429 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 PTPN6P29350 595 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 RAP1GDS1P52306 607 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 SLC12A2P55011 1212 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 PCDH1Q08174 1060 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 MGAT5Q09328 741 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 DDX39BQ13838 428 aaKnown RBP8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 SETDB1Q15047 1291 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 OR4D1Q15615 310 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 HLA-DQA1Q5Y7H0 255 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 STEAP4Q687X5 459 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 MED27Q6P2C8 311 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 ANGPTL8Q6UXH0 198 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 ANKMY2Q8IV38 441 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 LAS2Q8IYD9 372 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 PRR22Q8IZ63 422 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 ZCCHC7Q8N3Z6 543 aaKnown RBP8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 FAM83FQ8NEG4 500 aaPredicted RBP8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 OR7G3Q8NG95 312 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 EXT2Q93063 718 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 UCN3Q969E3 161 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 UBE2E3Q969T4 207 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 TP53INP1Q96A56 240 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 RGMAQ96B86 450 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 CMTM7Q96FZ5 175 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 TMEM41AQ96HV5 264 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 PBKQ96KB5 322 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 SECISBP2Q96T21 854 aaKnown RBP8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 NAP1L3Q99457 506 aaPredicted RBP8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 TM9SF2Q99805 663 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 PELOQ9BRX2 385 aaKnown RBP8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 CAB39LQ9H9S4 337 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 UBTD1Q9HAC8 227 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 SNX15Q9NRS6 342 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 KLHL28Q9NXS3 571 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 CD274Q9NZQ7 290 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 NDRG3Q9UGV2 375 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 TRPS1Q9UHF7 1281 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 PHF11Q9UIL8 331 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 PTBP2Q9UKA9 531 aaKnown RBP8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 PACSIN3Q9UKS6 424 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 TEX264Q9Y6I9 313 aa8.22□□□□□ -1.09
HNRNPC-227ENST00000556897 GOLGA6L10A0A0M3HER8 536 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 A0A1W2PR48 441 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 A0A1W2PS29 197 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 A8MXE2 369 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 GOLGA6L6A8MZA4 724 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 PLPP1O14494 284 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 PHGDHO43175 533 aaKnown RBP8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 CTIFO43310 598 aaKnown RBP8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 SLC35E2BP0CK96 405 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 SLC35E2P0CK97 266 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 CCDC166P0CW27 439 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 NR2F6P10588 404 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 CPN1P15169 458 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 CD1DP15813 335 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 IVDP26440 423 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 SERPINB1P30740 379 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 GCKP35557 465 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 BUD31P41223 144 aaPredicted RBP8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 TMED10P49755 219 aaKnown RBP8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 NRG3P56975 720 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 RPP38P78345 283 aaKnown RBP8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 FAM27E3Q08E93 113 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 CBLBQ13191 982 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 E2F2Q14209 437 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 FRG1Q14331 258 aaKnown RBP8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 ACKR1Q16570 336 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 CDKL4Q5MAI5 379 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 DEPDC1Q5TB30 811 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 ADGRE4PQ86SQ3 457 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 GAS2L3Q86XJ1 694 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 PDPRQ8NCN5 879 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 OR1J4Q8NGS1 313 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 HUS1BQ8NHY5 278 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 WNT2BQ93097 391 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 ADIPOR1Q96A54 375 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 NTNG2Q96CW9 530 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 PIK3IP1Q96FE7 263 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 ZFP3Q96NJ6 502 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 WFIKKN1Q96NZ8 548 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 MTERF1Q99551 399 aaKnown RBP8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 PIGQQ9BRB3 760 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 CENPKQ9BS16 269 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 MCMBPQ9BTE3 642 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 G6PC3Q9BUM1 346 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 CD244Q9BZW8 370 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 DDX47Q9H0S4 455 aaKnown RBP8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 ACBD3Q9H3P7 528 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 PIGMQ9H3S5 423 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 RHOJQ9H4E5 214 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 METTL7AQ9H8H3 244 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 CXorf21Q9HAI6 301 aa8.21□□□□□ -1.1
HNRNPC-227ENST00000556897 POPDC3Q9HBV1 291 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms