RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 MCEMP1Q8IX19 187 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 SLC22A18ASQ8N1D0 253 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 METTL27Q8N6F8 245 aaPredicted RBP4.66□□□□□ -1.66
HIF1A-209ENST00000556827 TMEM35BQ8NCS4 154 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 DENND6BQ8NEG7 585 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 CXorf40AQ8TE69 158 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 NELFBQ8WX92 580 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 TMEM159Q96B96 161 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 SLC22A18Q96BI1 424 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 BMFQ96LC9 184 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 DACH2Q96NX9 599 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 CCDC3Q9BQI4 270 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 ZYG11BQ9C0D3 744 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 MMP28Q9H239 520 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 CCDC68Q9H2F9 335 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 GOLPH3LQ9H4A5 285 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 ZDHHC6Q9H6R6 413 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 CHMP1AQ9HD42 196 aaPredicted RBP4.66□□□□□ -1.66
HIF1A-209ENST00000556827 ASCL3Q9NQ33 180 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 NSMCE4AQ9NXX6 385 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 IL17BQ9UHF5 180 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 RPS6KA6Q9UK32 745 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 OR51B4Q9Y5P0 310 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 FADS3Q9Y5Q0 445 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 ASCC3Q8N3C0 2202 aaKnown RBP4.66□□□□□ -1.66
HIF1A-209ENST00000556827 ADAMTS9Q9P2N4 1935 aa4.66□□□□□ -1.66
HIF1A-209ENST00000556827 ANKRD11Q6UB99 2663 aaPredicted RBP4.65□□□□□ -1.66
HIF1A-209ENST00000556827 IGLV5-45A0A087WSX0 123 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 CXorf51AA0A1B0GTR3 108 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 PCNX2A6NKB5 2137 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 C10orf142B7Z368 130 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 K7ERQ8 282 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 NDUFS4O43181 175 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 BUD23O43709 281 aaKnown RBP4.65□□□□□ -1.67
HIF1A-209ENST00000556827 TM7SF2O76062 418 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 CTSLP07711 333 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 DESP17661 470 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 CBLP22681 906 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 MMP15P51511 669 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 CCNHP51946 323 aaPredicted RBP4.65□□□□□ -1.67
HIF1A-209ENST00000556827 SNRPEP62304 92 aaKnown RBP4.65□□□□□ -1.67
HIF1A-209ENST00000556827 GNA12Q03113 381 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 ELP6Q0PNE2 266 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 C1orf61Q13536 156 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 PEX6Q13608 980 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 EXOC3L4Q17RC7 722 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 SLC25A52Q3SY17 297 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 NDUFAF5Q5TEU4 345 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 RWDD4Q6NW29 188 aaKnown RBP4.65□□□□□ -1.67
HIF1A-209ENST00000556827 MACC1Q6ZN28 852 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 FAM183BPQ6ZVS7 135 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 LDB1Q86U70 411 aaPredicted RBP4.65□□□□□ -1.67
HIF1A-209ENST00000556827 VPS36Q86VN1 386 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 ARL10Q8N8L6 244 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 CCDC112Q8NEF3 446 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 ZNF397Q8NF99 534 aaPredicted RBP4.65□□□□□ -1.67
HIF1A-209ENST00000556827 ISG20Q96AZ6 181 aaKnown RBP4.65□□□□□ -1.67
HIF1A-209ENST00000556827 ST6GAL2Q96JF0 529 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 GDAP1L1Q96MZ0 367 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 CPXM1Q96SM3 734 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 CDRT15Q96T59 188 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 CRACR2AQ9BSW2 395 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 RTN4RQ9BZR6 473 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 DENND2DQ9H6A0 471 aaPredicted RBP4.65□□□□□ -1.67
HIF1A-209ENST00000556827 PIGVQ9NUD9 493 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 TMEM5Q9Y2B1 443 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 ITPR1Q14643 2758 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 PTPRDP23468 1912 aa4.65□□□□□ -1.67
HIF1A-209ENST00000556827 DSPP15924 2871 aaKnown RBP4.65□□□□□ -1.67
HIF1A-209ENST00000556827 COL5A1P20908 1838 aaPredicted RBP4.65□□□□□ -1.67
HIF1A-209ENST00000556827 DMXL2Q8TDJ6 3036 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 ZFYVE26Q68DK2 2539 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 A0A0D9SEW6 157 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 ZSCAN5CA6NGD5 496 aaPredicted RBP4.64□□□□□ -1.67
HIF1A-209ENST00000556827 PES1O00541 588 aaKnown RBP4.64□□□□□ -1.67
HIF1A-209ENST00000556827 TO15178 435 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 NVLO15381 856 aaKnown RBP4.64□□□□□ -1.67
HIF1A-209ENST00000556827 BUB1O43683 1085 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 AVILO75366 819 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 CREG1O75629 220 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 SLC22A3O75751 556 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 BCL10O95999 233 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 GSRP00390 522 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 TNFP01375 233 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 RPLP0P05388 317 aaKnown RBP4.64□□□□□ -1.67
HIF1A-209ENST00000556827 GIMD1P0DJR0 217 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 LIPCP11150 499 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 SAT1P21673 171 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 UGT1A5P35504 534 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 MTIF2P46199 727 aaKnown RBP4.64□□□□□ -1.67
HIF1A-209ENST00000556827 MLLT10P55197 1068 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 STX17P56962 302 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 PFN3P60673 137 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 SRP54P61011 504 aaKnown RBP4.64□□□□□ -1.67
HIF1A-209ENST00000556827 EIF4EBP2Q13542 120 aaPredicted RBP4.64□□□□□ -1.67
HIF1A-209ENST00000556827 MELKQ14680 651 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 ZNF449Q6P9G9 518 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 TRIM65Q6PJ69 517 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 PACS1Q6VY07 963 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 TAF8Q7Z7C8 310 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms