RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 FBXO25Q8TCJ0 367 aa3.38□□□□□ -1.87
SCFD1-221ENST00000556534 CCDC47Q96A33 483 aaKnown RBP3.38□□□□□ -1.87
SCFD1-221ENST00000556534 RBM18Q96H35 190 aaKnown RBP3.38□□□□□ -1.87
SCFD1-221ENST00000556534 TMEM237Q96Q45 408 aa3.38□□□□□ -1.87
SCFD1-221ENST00000556534 FUNDC2Q9BWH2 189 aa3.38□□□□□ -1.87
SCFD1-221ENST00000556534 FGD5Q6ZNL6 1462 aa3.38□□□□□ -1.87
SCFD1-221ENST00000556534 IGHV3OR16-12A0A075B7B8 117 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 TSC22D2O75157 780 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 RHBDL1O75783 438 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 PNPP00491 289 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 SERPINF2P08697 491 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 MMP10P09238 476 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 UMPSP11172 480 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 MBL2P11226 248 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-221ENST00000556534 P4HA1P13674 534 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 HSD17B1P14061 328 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 FCARP24071 287 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 CALML3P27482 149 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 HMGCLP35914 325 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 TRIM23P36406 574 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 TNFRSF4P43489 277 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 UCP2P55851 309 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 CBX3Q13185 183 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 EXOSC7Q15024 291 aaKnown RBP3.37□□□□□ -1.87
SCFD1-221ENST00000556534 PARP10Q53GL7 1025 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 PRR30Q53SZ7 412 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-221ENST00000556534 ACER2Q5QJU3 275 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 RTL6Q6ICC9 239 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 CDC42EP5Q6NZY7 148 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 CNSTQ6PJW8 725 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 PAMR1Q6UXH9 720 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 B3GLCTQ6Y288 498 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 MOB2Q70IA6 237 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 SERPINA12Q8IW75 414 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 ZBED8Q8IZ13 594 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 RDH11Q8TC12 318 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 RAB3CQ96E17 227 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 ZBED6CLQ96FA7 236 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-221ENST00000556534 THAP9Q9H5L6 903 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 ZCCHC3Q9NUD5 404 aaKnown RBP3.37□□□□□ -1.87
SCFD1-221ENST00000556534 AKAP7Q9P0M2 348 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-221ENST00000556534 SEC14L4Q9UDX3 406 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 NARFQ9UHQ1 456 aa3.37□□□□□ -1.87
SCFD1-221ENST00000556534 FAM168BA1KXE4 195 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 SAP18O00422 153 aaKnown RBP3.36□□□□□ -1.87
SCFD1-221ENST00000556534 VEGFDO43915 354 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 GMNNO75496 209 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 DUX4L4P0CJ87 422 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 KLK2P20151 261 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 AZU1P20160 251 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 FASP25445 335 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 UCP1P25874 307 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 CD86P42081 329 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 MFAP2P55001 183 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 STARD6P59095 220 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 IL1RL1Q01638 556 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 WASHC5Q12768 1159 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 NPRL3Q12980 569 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 KRT31Q15323 416 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 HAGHQ16775 308 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 DDI2Q5TDH0 399 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 FAM219BQ5XKK7 198 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 CGB2Q6NT52 195 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 SLC22A16Q86VW1 577 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 ARL14Q8N4G2 192 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 C11orf42Q8N5U0 333 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 TBCKQ8TEA7 893 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 CRYGNQ8WXF5 182 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 ATP6V0A1Q93050 837 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 BIRC7Q96CA5 298 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 C5orf30Q96GV9 206 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 PPP1R16AQ96I34 528 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 RPGRIP1Q96KN7 1286 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 PRAM1Q96QH2 718 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 ELL3Q9HB65 397 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-221ENST00000556534 CIDEBQ9UHD4 219 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 RSPH14Q9UHP6 348 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 ISY1Q9ULR0 285 aaKnown RBP3.36□□□□□ -1.87
SCFD1-221ENST00000556534 KIF25-AS1Q9Y6Z4 181 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 FAM205AQ6ZU69 1335 aa3.36□□□□□ -1.87
SCFD1-221ENST00000556534 A0A0A6YYD4 124 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 SH2D1BO14796 132 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 ZBTB14O43829 449 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 REC8O95072 547 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 OAS1P00973 400 aaKnown RBP3.35□□□□□ -1.87
SCFD1-221ENST00000556534 IGHV3-9P01782 118 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 SFTPBP07988 381 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 UGT1A6P19224 532 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 CHRNA3P32297 505 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 NDST1P52848 882 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 CDKL1Q00532 357 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 TEFQ10587 303 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 SEL1L2Q5TEA6 688 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 RABEPKQ7Z6M1 372 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 PEX5LQ8IYB4 626 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 LINC00518Q8N0U6 118 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 ZNF671Q8TAW3 534 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 RAB39BQ96DA2 213 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 TBC1D31Q96DN5 1066 aa3.35□□□□□ -1.87
SCFD1-221ENST00000556534 SERAC1Q96JX3 654 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms