RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 GOLGA8NF8WBI6 632 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 I3L1I5 382 aaPredicted RBP4.86□□□□□ -1.63
SRP54-211ENST00000556445 ST8SIA3O43173 380 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 MTX2O75431 263 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 WDR47O94967 919 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 KLHL2O95198 593 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 IGSF6O95976 241 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 FGF4P08620 206 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 THRBP10828 461 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 IRF1P10914 325 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 EZRP15311 586 aaKnown RBP4.86□□□□□ -1.63
SRP54-211ENST00000556445 DRD1P21728 446 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 HNRNPA2B1P22626 353 aaKnown RBP4.86□□□□□ -1.63
SRP54-211ENST00000556445 ACP1P24666 158 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 UQCRC1P31930 480 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 AVPR1AP37288 418 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 FRKP42685 505 aaPredicted RBP4.86□□□□□ -1.63
SRP54-211ENST00000556445 SLC1A2P43004 574 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 SLC1A6P48664 564 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 CSRP3P50461 194 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 CLCN4P51793 760 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 MNAT1P51948 309 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 PLK1P53350 603 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 ABCE1P61221 599 aaKnown RBP4.86□□□□□ -1.63
SRP54-211ENST00000556445 MAXP61244 160 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 RHOAP61586 193 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 SSBP2P81877 361 aaPredicted RBP4.86□□□□□ -1.63
SRP54-211ENST00000556445 HOXA4Q00056 320 aaPredicted RBP4.86□□□□□ -1.63
SRP54-211ENST00000556445 TLE3Q04726 772 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 MZT1Q08AG7 82 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 BST1Q10588 318 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 GRSF1Q12849 480 aaKnown RBP eCLIP4.86□□□□□ -1.63
SRP54-211ENST00000556445 MSLNQ13421 630 aaPredicted RBP4.86□□□□□ -1.63
SRP54-211ENST00000556445 OLIG2Q13516 323 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 GALNT3Q14435 633 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 SNAPC1Q16533 368 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 TCTE1Q5JU00 501 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 CFAP157Q5JU67 520 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 SIRPB2Q5JXA9 342 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 PRAMEF17Q5VTA0 474 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 LYPLAL1Q5VWZ2 237 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 TXNDC8Q6A555 127 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 CGB2Q6NT52 195 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 UGT3A1Q6NUS8 523 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 METAP1DQ6UB28 335 aaPredicted RBP4.86□□□□□ -1.63
SRP54-211ENST00000556445 CERS6Q6ZMG9 384 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 DPY19L3Q6ZPD9 716 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 C1QL2Q7Z5L3 287 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 TMEM150AQ86TG1 271 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 SERPINA12Q8IW75 414 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 C10orf67Q8IYJ2 551 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 PM20D2Q8IYS1 436 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 BATF2Q8N1L9 274 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 STK40Q8N2I9 435 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 PGBD5Q8N414 524 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 ARL14EPQ8N8R7 260 aaPredicted RBP4.86□□□□□ -1.63
SRP54-211ENST00000556445 ABHD11Q8NFV4 315 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 OR10S1Q8NGN2 331 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 OR4L1Q8NH43 312 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 RNASE8Q8TDE3 154 aaKnown RBP4.86□□□□□ -1.63
SRP54-211ENST00000556445 BLOC1S5Q8TDH9 187 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 DDI1Q8WTU0 396 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 SGCDQ92629 289 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 ISG20Q96AZ6 181 aaKnown RBP4.86□□□□□ -1.63
SRP54-211ENST00000556445 HS6ST2Q96MM7 605 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 PRICKLE1Q96MT3 831 aaPredicted RBP4.86□□□□□ -1.63
SRP54-211ENST00000556445 CDRT15Q96T59 188 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 MRPL57Q9BQC6 102 aaKnown RBP4.86□□□□□ -1.63
SRP54-211ENST00000556445 C1QTNF7Q9BXJ2 289 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 SLC2A11Q9BYW1 496 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 RMND5AQ9H871 391 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 ECT2Q9H8V3 914 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 AKIRIN1Q9H9L7 192 aaPredicted RBP4.86□□□□□ -1.63
SRP54-211ENST00000556445 NLE1Q9NVX2 485 aaPredicted RBP4.86□□□□□ -1.63
SRP54-211ENST00000556445 FAM118AQ9NWS6 357 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 TMCO1Q9UM00 188 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 SNX6Q9UNH7 406 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 DLGAP4Q9Y2H0 992 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 PKP3Q9Y446 797 aa4.86□□□□□ -1.63
SRP54-211ENST00000556445 KIAA0100Q14667 2235 aaKnown RBP4.85□□□□□ -1.63
SRP54-211ENST00000556445 A0A0G2JND7 137 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 C2orf92A0A1B0GVN3 265 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 FAM230AA0A1W2PPH8 454 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 C5orf52A6NGY3 159 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 ANKRD66B4E2M5 251 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 H3BMM5 538 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 CASC3O15234 703 aaKnown RBP4.85□□□□□ -1.63
SRP54-211ENST00000556445 STX7O15400 261 aaKnown RBP4.85□□□□□ -1.63
SRP54-211ENST00000556445 LDB2O43679 373 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 ZMPSTE24O75844 475 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 TMCC1O94876 653 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 OR6B1O95007 311 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 BCL10O95999 233 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 PCCBP05166 539 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 S100A9P06702 114 aaKnown RBP4.85□□□□□ -1.63
SRP54-211ENST00000556445 FGF3P11487 239 aaPredicted RBP4.85□□□□□ -1.63
SRP54-211ENST00000556445 CALB2P22676 271 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 ITGB8P26012 769 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 ALDH4A1P30038 563 aa4.85□□□□□ -1.63
SRP54-211ENST00000556445 TTPAP49638 278 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms