RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 ZNF615Q8N8J6 731 aa20.75■□□□□ 0.91
ACTN1-220ENST00000556433 NOA1Q8NC60 698 aaKnown RBP20.75■□□□□ 0.91
ACTN1-220ENST00000556433 NEIL3Q8TAT5 605 aa20.75■□□□□ 0.91
ACTN1-220ENST00000556433 FMO2Q99518 471 aa20.75■□□□□ 0.91
ACTN1-220ENST00000556433 ZNF559Q9BR84 538 aa20.75■□□□□ 0.91
ACTN1-220ENST00000556433 SLC12A4Q9UP95 1085 aa20.75■□□□□ 0.91
ACTN1-220ENST00000556433 FAM47E-STBD1D6RA91 191 aa20.74■□□□□ 0.91
ACTN1-220ENST00000556433 TRIM3O75382 744 aaPredicted RBP20.74■□□□□ 0.91
ACTN1-220ENST00000556433 CPMP14384 443 aa20.74■□□□□ 0.91
ACTN1-220ENST00000556433 PORP16435 677 aaPredicted RBP20.74■□□□□ 0.91
ACTN1-220ENST00000556433 CNTFP26441 200 aa20.74■□□□□ 0.91
ACTN1-220ENST00000556433 GDF1P27539 372 aa20.74■□□□□ 0.91
ACTN1-220ENST00000556433 MAPK12P53778 367 aa20.74■□□□□ 0.91
ACTN1-220ENST00000556433 CDH13P55290 713 aa20.74■□□□□ 0.91
ACTN1-220ENST00000556433 RPS6KA2Q15349 733 aa20.74■□□□□ 0.91
ACTN1-220ENST00000556433 OR7G1Q8NGA0 311 aa20.74■□□□□ 0.91
ACTN1-220ENST00000556433 SPPL2AQ8TCT8 520 aa20.74■□□□□ 0.91
ACTN1-220ENST00000556433 DCAKDQ8WVC6 231 aa20.74■□□□□ 0.91
ACTN1-220ENST00000556433 ZNF592Q92610 1267 aa20.74■□□□□ 0.91
ACTN1-220ENST00000556433 ADIPOR1Q96A54 375 aa20.74■□□□□ 0.91
ACTN1-220ENST00000556433 ZNF597Q96LX8 424 aa20.74■□□□□ 0.91
ACTN1-220ENST00000556433 MRPL46Q9H2W6 279 aaKnown RBP20.74■□□□□ 0.91
ACTN1-220ENST00000556433 FARSBQ9NSD9 589 aaKnown RBP20.74■□□□□ 0.91
ACTN1-220ENST00000556433 KCNN3Q9UGI6 736 aa20.74■□□□□ 0.91
ACTN1-220ENST00000556433 F8P00451 2351 aa20.74■□□□□ 0.91
ACTN1-220ENST00000556433 TACC2O95359 2948 aa20.74■□□□□ 0.91
ACTN1-220ENST00000556433 A0A1B0GTL3 188 aa20.73■□□□□ 0.91
ACTN1-220ENST00000556433 PPP6CO00743 305 aa20.73■□□□□ 0.91
ACTN1-220ENST00000556433 GUCY1B2O75343 617 aa20.73■□□□□ 0.91
ACTN1-220ENST00000556433 OTCP00480 354 aa20.73■□□□□ 0.91
ACTN1-220ENST00000556433 RPS17P08708 135 aaKnown RBP20.73■□□□□ 0.91
ACTN1-220ENST00000556433 TSPAN8P19075 237 aa20.73■□□□□ 0.91
ACTN1-220ENST00000556433 DEKP35659 375 aaKnown RBP20.73■□□□□ 0.91
ACTN1-220ENST00000556433 NRG3P56975 720 aa20.73■□□□□ 0.91
ACTN1-220ENST00000556433 BICRALQ6AI39 1079 aa20.73■□□□□ 0.91
ACTN1-220ENST00000556433 COMMD6Q7Z4G1 85 aa20.73■□□□□ 0.91
ACTN1-220ENST00000556433 MYRIPQ8NFW9 859 aa20.73■□□□□ 0.91
ACTN1-220ENST00000556433 TRPC4APQ8TEL6 797 aa20.73■□□□□ 0.91
ACTN1-220ENST00000556433 ZNF483Q8TF39 744 aaPredicted RBP20.73■□□□□ 0.91
ACTN1-220ENST00000556433 SELENOMQ8WWX9 145 aa20.73■□□□□ 0.91
ACTN1-220ENST00000556433 ZNF180Q9UJW8 692 aa20.73■□□□□ 0.91
ACTN1-220ENST00000556433 PCDHGB3Q9Y5G1 929 aa20.73■□□□□ 0.91
ACTN1-220ENST00000556433 PCDHA9Q9Y5H5 950 aa20.73■□□□□ 0.91
ACTN1-220ENST00000556433 C15orf38-AP3S2A0A0A6YYH1 394 aa20.72■□□□□ 0.91
ACTN1-220ENST00000556433 TRAPPC6AO75865 159 aa20.72■□□□□ 0.91
ACTN1-220ENST00000556433 SNX4O95219 450 aa20.72■□□□□ 0.91
ACTN1-220ENST00000556433 PDYNP01213 254 aa20.72■□□□□ 0.91
ACTN1-220ENST00000556433 TMED10P49755 219 aaKnown RBP20.72■□□□□ 0.91
ACTN1-220ENST00000556433 DUSP8Q13202 625 aa20.72■□□□□ 0.91
ACTN1-220ENST00000556433 MYBPHQ13203 477 aa20.72■□□□□ 0.91
ACTN1-220ENST00000556433 TEX35Q5T0J7 233 aa20.72■□□□□ 0.91
ACTN1-220ENST00000556433 RIPPLY2Q5TAB7 128 aa20.72■□□□□ 0.91
ACTN1-220ENST00000556433 CES4AQ5XG92 561 aa20.72■□□□□ 0.91
ACTN1-220ENST00000556433 ULK2Q8IYT8 1036 aa20.72■□□□□ 0.91
ACTN1-220ENST00000556433 PRR22Q8IZ63 422 aa20.72■□□□□ 0.91
ACTN1-220ENST00000556433 RILPQ96NA2 401 aa20.72■□□□□ 0.91
ACTN1-220ENST00000556433 SECISBP2Q96T21 854 aaKnown RBP20.72■□□□□ 0.91
ACTN1-220ENST00000556433 ANGPTL4Q9BY76 406 aa20.72■□□□□ 0.91
ACTN1-220ENST00000556433 SLC24A3Q9HC58 644 aa20.72■□□□□ 0.91
ACTN1-220ENST00000556433 CES1P1Q9UKY3 287 aa20.72■□□□□ 0.91
ACTN1-220ENST00000556433 SNX6Q9UNH7 406 aa20.72■□□□□ 0.91
ACTN1-220ENST00000556433 A0A087WUV0 522 aaPredicted RBP20.71■□□□□ 0.91
ACTN1-220ENST00000556433 C1orf226A1L170 272 aa20.71■□□□□ 0.91
ACTN1-220ENST00000556433 A8MT66 165 aa20.71■□□□□ 0.91
ACTN1-220ENST00000556433 ERAL1O75616 437 aaKnown RBP20.71■□□□□ 0.91
ACTN1-220ENST00000556433 SNRPAP09012 282 aaKnown RBP20.71■□□□□ 0.91
ACTN1-220ENST00000556433 SBK3P0C264 359 aa20.71■□□□□ 0.91
ACTN1-220ENST00000556433 KRT15P19012 456 aa20.71■□□□□ 0.91
ACTN1-220ENST00000556433 S1PR1P21453 382 aa20.71■□□□□ 0.91
ACTN1-220ENST00000556433 ECHS1P30084 290 aa20.71■□□□□ 0.91
ACTN1-220ENST00000556433 FEN1P39748 380 aaKnown RBP20.71■□□□□ 0.91
ACTN1-220ENST00000556433 RPP38P78345 283 aaKnown RBP20.71■□□□□ 0.91
ACTN1-220ENST00000556433 SLC25A35Q3KQZ1 300 aa20.71■□□□□ 0.91
ACTN1-220ENST00000556433 SLC48A1Q6P1K1 146 aa20.71■□□□□ 0.91
ACTN1-220ENST00000556433 LETMD1Q6P1Q0 360 aa20.71■□□□□ 0.91
ACTN1-220ENST00000556433 FAM111BQ6SJ93 734 aa20.71■□□□□ 0.91
ACTN1-220ENST00000556433 WDR53Q7Z5U6 358 aaPredicted RBP20.71■□□□□ 0.91
ACTN1-220ENST00000556433 PACS2Q86VP3 889 aa20.71■□□□□ 0.91
ACTN1-220ENST00000556433 TMEM151AQ8N4L1 468 aa20.71■□□□□ 0.91
ACTN1-220ENST00000556433 MNS1Q8NEH6 495 aa20.71■□□□□ 0.91
ACTN1-220ENST00000556433 TM4SF18Q96CE8 201 aa20.71■□□□□ 0.91
ACTN1-220ENST00000556433 BRINP2Q9C0B6 783 aa20.71■□□□□ 0.91
ACTN1-220ENST00000556433 NMRK1Q9NWW6 199 aa20.71■□□□□ 0.91
ACTN1-220ENST00000556433 BCAP29Q9UHQ4 241 aa20.71■□□□□ 0.91
ACTN1-220ENST00000556433 GOLGA6L10A6NI86 522 aa20.7■□□□□ 0.9
ACTN1-220ENST00000556433 AHRRA9YTQ3 701 aa20.7■□□□□ 0.9
ACTN1-220ENST00000556433 CSNK2A2P19784 350 aaPredicted RBP20.7■□□□□ 0.9
ACTN1-220ENST00000556433 GPX3P22352 226 aa20.7■□□□□ 0.9
ACTN1-220ENST00000556433 CASP3P42574 277 aa20.7■□□□□ 0.9
ACTN1-220ENST00000556433 MASP1P48740 699 aa20.7■□□□□ 0.9
ACTN1-220ENST00000556433 DLX5P56178 289 aa20.7■□□□□ 0.9
ACTN1-220ENST00000556433 GALNT1Q10472 559 aaPredicted RBP20.7■□□□□ 0.9
ACTN1-220ENST00000556433 MAP4K2Q12851 820 aa20.7■□□□□ 0.9
ACTN1-220ENST00000556433 TESK1Q15569 626 aa20.7■□□□□ 0.9
ACTN1-220ENST00000556433 PRICKLE4Q2TBC4 344 aa20.7■□□□□ 0.9
ACTN1-220ENST00000556433 GLE1Q53GS7 698 aaKnown RBP20.7■□□□□ 0.9
ACTN1-220ENST00000556433 LGSNQ5TDP6 509 aa20.7■□□□□ 0.9
ACTN1-220ENST00000556433 TMEM200AQ86VY9 491 aa20.7■□□□□ 0.9
ACTN1-220ENST00000556433 MMP21Q8N119 569 aa20.7■□□□□ 0.9
ACTN1-220ENST00000556433 VWA5B2Q8N398 1253 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms