RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 UPK1AO00322 258 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 FBP2O00757 339 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 NKX2-8O15522 239 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 EFSO43281 561 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 EMC8O43402 210 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 SOX30O94993 753 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 KCNH1O95259 989 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 ANP32DO95626 131 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 DDAH2O95865 285 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 IGKV3-11P04433 115 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 CT62P0C5K7 136 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 C1QTNF9P0C862 333 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 EFNA1P20827 205 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-221ENST00000555773 SOX18P35713 384 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 CCT3P49368 545 aaKnown RBP11.62□□□□□ -0.55
SHMT2-221ENST00000555773 CDK9P50750 372 aaKnown RBP11.62□□□□□ -0.55
SHMT2-221ENST00000555773 PGDP52209 483 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 UCNP55089 124 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 SLC26A5P58743 744 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 PRR5P85299 388 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 EEF1A2Q05639 463 aaKnown RBP11.62□□□□□ -0.55
SHMT2-221ENST00000555773 LTB4RQ15722 352 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 TRMT12Q53H54 448 aaKnown RBP11.62□□□□□ -0.55
SHMT2-221ENST00000555773 PAGE3Q5JUK9 113 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 C6orf10Q5SRN2 563 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 LRIF1Q5T3J3 769 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 PLAG1Q6DJT9 500 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 SLC2A7Q6PXP3 512 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 ZNF621Q6ZSS3 439 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 SPACA3Q8IXA5 215 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 TMEM102Q8N9M5 508 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-221ENST00000555773 OR7G2Q8NG99 324 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 OR56A1Q8NGH5 318 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 OR1N1Q8NGS0 311 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 SLC2A12Q8TD20 617 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 SFXN5Q8TD22 340 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 KAT2AQ92830 837 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 INPP5KQ9BT40 448 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 CNPPD1Q9BV87 410 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 SEMA4CQ9C0C4 833 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 OR8D2Q9GZM6 311 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 SIRT3Q9NTG7 399 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-221ENST00000555773 ARL8BQ9NVJ2 186 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 DDX18Q9NVP1 670 aaKnown RBP11.62□□□□□ -0.55
SHMT2-221ENST00000555773 GID8Q9NWU2 228 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-221ENST00000555773 MAP10Q9P2G4 905 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 COPS7AQ9UBW8 275 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 FBXL4Q9UKA2 621 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 SNX8Q9Y5X2 465 aa11.62□□□□□ -0.55
SHMT2-221ENST00000555773 CDC14CA4D256 554 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 OR6C76A6NM76 312 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 MRASO14807 208 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 PRAMEF2O60811 474 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 COQ9O75208 318 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 SEC24DO94855 1032 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-221ENST00000555773 ABCB1P08183 1280 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-221ENST00000555773 ESRRAP11474 423 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-221ENST00000555773 WT1P19544 449 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-221ENST00000555773 MC3RP41968 323 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 MAGEA8P43361 318 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 CLCN2P51788 898 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 RRADP55042 308 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 MRPS35P82673 323 aaKnown RBP11.61□□□□□ -0.55
SHMT2-221ENST00000555773 ART3Q13508 389 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 NFYCQ13952 458 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 SPDYE7PQ495Y7 208 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 FHL5Q5TD97 284 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 ZCCHC12Q6PEW1 402 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 C6orf89Q6UWU4 347 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 TMEM107Q6UX40 140 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 DLEU7Q6UYE1 221 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 CCDC81Q6ZN84 652 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 RETREG3Q86VR2 466 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 PROSER1Q86XN7 944 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 POU5F2Q8N7G0 328 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 ZNF615Q8N8J6 731 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 OR8K3Q8NH51 312 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 ZNF721Q8TF20 911 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 ROPN1LQ96C74 230 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 FAM120BQ96EK7 910 aaKnown RBP11.61□□□□□ -0.55
SHMT2-221ENST00000555773 VMP1Q96GC9 406 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 MESP1Q9BRJ9 268 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 TRIM4Q9C037 500 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 PAIP1Q9H074 479 aaKnown RBP11.61□□□□□ -0.55
SHMT2-221ENST00000555773 OR10A5Q9H207 317 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 CXorf36Q9H7Y0 433 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 MMP25Q9NPA2 562 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 ATP13A2Q9NQ11 1180 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 RYDENQ9NUL5 291 aaKnown RBP11.61□□□□□ -0.55
SHMT2-221ENST00000555773 PRODH2Q9UF12 536 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 ERVK-19Q9WJR5 959 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 PCDHB14Q9Y5E9 798 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 GMEB1Q9Y692 573 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 AKAP13Q12802 2813 aa11.61□□□□□ -0.55
SHMT2-221ENST00000555773 A0A087WV48 116 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 TTC36A6NLP5 189 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 EBAG9O00559 213 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 AIM2O14862 343 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 PSMG1O95456 288 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms