RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 SPATA18Q8TC71 538 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 FBXO25Q8TCJ0 367 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 C9orf85Q96MD7 179 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 C17orf62Q9BQA9 187 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 ZNF559Q9BR84 538 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 CHMP4AQ9BY43 222 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 EHD1Q9H4M9 534 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 CIDEBQ9UHD4 219 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 ACEP12821 1306 aa1.56□□□□□ -2.16
SRP54-207ENST00000555535 MYO10Q9HD67 2058 aa1.55□□□□□ -2.16
SRP54-207ENST00000555535 TSPY2A6NKD2 308 aa1.55□□□□□ -2.16
SRP54-207ENST00000555535 H0YIG0 161 aa1.55□□□□□ -2.16
SRP54-207ENST00000555535 CTDSPLO15194 276 aa1.55□□□□□ -2.16
SRP54-207ENST00000555535 P4HA2O15460 535 aa1.55□□□□□ -2.16
SRP54-207ENST00000555535 OAS1P00973 400 aaKnown RBP1.55□□□□□ -2.16
SRP54-207ENST00000555535 CD5P06127 495 aa1.55□□□□□ -2.16
SRP54-207ENST00000555535 VIMP08670 466 aaKnown RBP1.55□□□□□ -2.16
SRP54-207ENST00000555535 PRKCIP41743 596 aa1.55□□□□□ -2.16
SRP54-207ENST00000555535 SLC7A2P52569 658 aa1.55□□□□□ -2.16
SRP54-207ENST00000555535 SLC12A3P55017 1021 aa1.55□□□□□ -2.16
SRP54-207ENST00000555535 CALD1Q05682 793 aaKnown RBP1.55□□□□□ -2.16
SRP54-207ENST00000555535 OR1C1Q15619 314 aa1.55□□□□□ -2.16
SRP54-207ENST00000555535 KCTD19Q17RG1 926 aaPredicted RBP1.55□□□□□ -2.16
SRP54-207ENST00000555535 DCAF4L1Q3SXM0 396 aa1.55□□□□□ -2.16
SRP54-207ENST00000555535 GLYR1Q49A26 553 aaPredicted RBP1.55□□□□□ -2.16
SRP54-207ENST00000555535 TFAP2EQ6VUC0 442 aa1.55□□□□□ -2.16
SRP54-207ENST00000555535 MOB1BQ7L9L4 216 aa1.55□□□□□ -2.16
SRP54-207ENST00000555535 ZNF444Q8N0Y2 327 aaPredicted RBP1.55□□□□□ -2.16
SRP54-207ENST00000555535 CKAP2Q8WWK9 683 aa1.55□□□□□ -2.16
SRP54-207ENST00000555535 MARC2Q969Z3 335 aa1.55□□□□□ -2.16
SRP54-207ENST00000555535 INTS14Q96SY0 518 aa1.55□□□□□ -2.16
SRP54-207ENST00000555535 NUSAP1Q9BXS6 441 aaKnown RBP1.55□□□□□ -2.16
SRP54-207ENST00000555535 TRIM9Q9C026 710 aa1.55□□□□□ -2.16
SRP54-207ENST00000555535 LSG1Q9H089 658 aaKnown RBP1.55□□□□□ -2.16
SRP54-207ENST00000555535 GDF3Q9NR23 364 aa1.55□□□□□ -2.16
SRP54-207ENST00000555535 TECRQ9NZ01 308 aaKnown RBP1.55□□□□□ -2.16
SRP54-207ENST00000555535 PSORS1C1Q9UIG5 152 aa1.55□□□□□ -2.16
SRP54-207ENST00000555535 GPR132Q9UNW8 380 aa1.55□□□□□ -2.16
SRP54-207ENST00000555535 PDE10AQ9Y233 779 aa1.55□□□□□ -2.16
SRP54-207ENST00000555535 RPH3AQ9Y2J0 694 aaPredicted RBP1.55□□□□□ -2.16
SRP54-207ENST00000555535 PRG3Q9Y2Y8 225 aaPredicted RBP1.55□□□□□ -2.16
SRP54-207ENST00000555535 KAT6BQ8WYB5 2073 aa1.55□□□□□ -2.16
SRP54-207ENST00000555535 A0A0U1RQK1 487 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 MAGEB16A2A368 324 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 C17orf51A8MQB3 221 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 MEI4A8MW99 385 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 KBTBD13C9JR72 458 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 IGFBP5P24593 272 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 EEF1DP29692 281 aaKnown RBP1.54□□□□□ -2.16
SRP54-207ENST00000555535 TRIM23P36406 574 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 ALDH3B2P48448 385 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 TKTL1P51854 596 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 RAD23AP54725 363 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 UCP2P55851 309 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 GABPAQ06546 454 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 ORC2Q13416 577 aaPredicted RBP1.54□□□□□ -2.16
SRP54-207ENST00000555535 EIF4EBP1Q13541 118 aaPredicted RBP1.54□□□□□ -2.16
SRP54-207ENST00000555535 C1orf189Q5VU69 101 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 CERS3Q8IU89 383 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 KRTAP13-1Q8IUC0 172 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 ZNF786Q8N393 782 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 TRPV3Q8NET8 790 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 ZNF397Q8NF99 534 aaPredicted RBP1.54□□□□□ -2.16
SRP54-207ENST00000555535 AGPAT1Q99943 283 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 DPH7Q9BTV6 452 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 IDI2Q9BXS1 227 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 LRRC2Q9BYS8 371 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 TXLNGYQ9BZA5 131 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 CCSER1Q9C0I3 900 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 ELOVL4Q9GZR5 314 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 RABEP2Q9H5N1 569 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 NANOGQ9H9S0 305 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 MIS18AQ9NYP9 233 aa1.54□□□□□ -2.16
SRP54-207ENST00000555535 HTR3EA5X5Y0 456 aa1.53□□□□□ -2.16
SRP54-207ENST00000555535 CHUKO15111 745 aa1.53□□□□□ -2.16
SRP54-207ENST00000555535 TSPAN2O60636 221 aa1.53□□□□□ -2.16
SRP54-207ENST00000555535 GPX5O75715 221 aa1.53□□□□□ -2.16
SRP54-207ENST00000555535 HPNP05981 417 aa1.53□□□□□ -2.16
SRP54-207ENST00000555535 ZFYP08048 801 aaPredicted RBP1.53□□□□□ -2.16
SRP54-207ENST00000555535 COL1A2P08123 1366 aa1.53□□□□□ -2.16
SRP54-207ENST00000555535 IGHV1-2P23083 117 aa1.53□□□□□ -2.16
SRP54-207ENST00000555535 FBN1P35555 2871 aaKnown RBP1.53□□□□□ -2.16
SRP54-207ENST00000555535 IER3P46695 156 aa1.53□□□□□ -2.16
SRP54-207ENST00000555535 PFN3P60673 137 aa1.53□□□□□ -2.16
SRP54-207ENST00000555535 ASPHD2Q6ICH7 369 aa1.53□□□□□ -2.16
SRP54-207ENST00000555535 PODNL1Q6PEZ8 512 aa1.53□□□□□ -2.16
SRP54-207ENST00000555535 DCLRE1AQ6PJP8 1040 aa1.53□□□□□ -2.16
SRP54-207ENST00000555535 MFSD7Q6UXD7 560 aa1.53□□□□□ -2.16
SRP54-207ENST00000555535 CCDC186Q7Z3E2 898 aa1.53□□□□□ -2.16
SRP54-207ENST00000555535 TMEM179BQ7Z7N9 219 aa1.53□□□□□ -2.16
SRP54-207ENST00000555535 DZIP1Q86YF9 867 aaKnown RBP1.53□□□□□ -2.16
SRP54-207ENST00000555535 SETD6Q8TBK2 473 aa1.53□□□□□ -2.16
SRP54-207ENST00000555535 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.53□□□□□ -2.16
SRP54-207ENST00000555535 DHTKD1Q96HY7 919 aaPredicted RBP1.53□□□□□ -2.16
SRP54-207ENST00000555535 PRAM1Q96QH2 718 aa1.53□□□□□ -2.16
SRP54-207ENST00000555535 FAM173AQ9BQD7 235 aa1.53□□□□□ -2.16
SRP54-207ENST00000555535 ANKEF1Q9NU02 776 aa1.53□□□□□ -2.16
SRP54-207ENST00000555535 SLC2A6Q9UGQ3 507 aa1.53□□□□□ -2.16
SRP54-207ENST00000555535 A0A0A6YYD4 124 aa1.52□□□□□ -2.17
SRP54-207ENST00000555535 ST8SIA3O43173 380 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms