RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 SFXN5Q8TD22 340 aa16.54■□□□□ 0.24
PSEN1-212ENST00000555254 POP5Q969H6 163 aaKnown RBP16.54■□□□□ 0.24
PSEN1-212ENST00000555254 REXO5Q96IC2 774 aaKnown RBP16.54■□□□□ 0.24
PSEN1-212ENST00000555254 ZNF681Q96N22 645 aa16.54■□□□□ 0.24
PSEN1-212ENST00000555254 SIDT1Q9NXL6 827 aaKnown RBP16.54■□□□□ 0.24
PSEN1-212ENST00000555254 EGFL7Q9UHF1 273 aa16.54■□□□□ 0.24
PSEN1-212ENST00000555254 MAU2Q9Y6X3 613 aa16.54■□□□□ 0.24
PSEN1-212ENST00000555254 H3BMH7 237 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 EMC8O43402 210 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 OR10H2O60403 315 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 ATP6V1G2O95670 118 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 CDK9P50750 372 aaKnown RBP16.53■□□□□ 0.24
PSEN1-212ENST00000555254 OR4D2P58180 307 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 AP2B1P63010 937 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 MAT1AQ00266 395 aaKnown RBP16.53■□□□□ 0.24
PSEN1-212ENST00000555254 FADDQ13158 208 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 CCNIQ14094 377 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 DSG2Q14126 1118 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 RGNQ15493 299 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 TGIF1Q15583 401 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 CEBPEQ15744 281 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 ZNF750Q32MQ0 723 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 ARHGAP40Q5TG30 622 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 CPZQ66K79 652 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 GLYATQ6IB77 296 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 C6orf120Q7Z4R8 191 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 CALHM3Q86XJ0 350 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 PTRH1Q86Y79 214 aaKnown RBP16.53■□□□□ 0.24
PSEN1-212ENST00000555254 CLEC4FQ8N1N0 589 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 OR5AK3PQ8NH89 298 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 CLIP3Q96DZ5 547 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 NEURL3Q96EH8 262 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 IKZF5Q9H5V7 419 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 DCLRE1BQ9H816 532 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 DHCR7Q9UBM7 475 aaKnown RBP16.53■□□□□ 0.24
PSEN1-212ENST00000555254 TRPC4Q9UBN4 977 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 ERVK-11Q9UQG0 969 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 MAP4K5Q9Y4K4 846 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 PCDHGA3Q9Y5H0 932 aa16.53■□□□□ 0.24
PSEN1-212ENST00000555254 A0A087WV48 116 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 TMEM247A6NEH6 219 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 AQP12BA6NM10 295 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 ARPC2O15144 300 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 SCRG1O75711 98 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 SLITRK5O94991 958 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 PSMG1O95456 288 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 FHP07954 510 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 ATXN8OSP0DMR3 200 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 NT5EP21589 574 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 SOX11P35716 441 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 XCR1P46094 333 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 OR1D4P47884 311 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 HSD17B7P56937 341 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 TXNL4AP83876 142 aaKnown RBP16.52■□□□□ 0.24
PSEN1-212ENST00000555254 ID2Q02363 134 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 TP53BP2Q13625 1128 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 MTX3Q5HYI7 312 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.52■□□□□ 0.24
PSEN1-212ENST00000555254 GCNT6Q5T4J0 391 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 C1orf189Q5VU69 101 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 FBXW10Q5XX13 1052 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 SAXO2Q658L1 398 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 LCN8Q6JVE9 175 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 ZFP1Q6P2D0 407 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 CYP2R1Q6VVX0 501 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 RNF130Q86XS8 419 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 SPACA3Q8IXA5 215 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 AQP12AQ8IXF9 295 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 FIG4Q92562 907 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 NCLNQ969V3 563 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 FAM162AQ96A26 154 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 MAGED4Q96JG8 741 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 NSMCE2Q96MF7 247 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 OR1F2PQ96R84 312 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 PELOQ9BRX2 385 aaKnown RBP16.52■□□□□ 0.24
PSEN1-212ENST00000555254 B3GNT4Q9C0J1 378 aa16.52■□□□□ 0.24
PSEN1-212ENST00000555254 ZCCHC3Q9NUD5 404 aaKnown RBP16.52■□□□□ 0.24
PSEN1-212ENST00000555254 THUMPD1Q9NXG2 353 aaKnown RBP16.52■□□□□ 0.24
PSEN1-212ENST00000555254 GMPR2Q9P2T1 348 aaKnown RBP16.52■□□□□ 0.24
PSEN1-212ENST00000555254 FAF1Q9UNN5 650 aaPredicted RBP16.52■□□□□ 0.24
PSEN1-212ENST00000555254 KIF26BQ2KJY2 2108 aa16.51■□□□□ 0.23
PSEN1-212ENST00000555254 CXCR6O00574 342 aa16.51■□□□□ 0.23
PSEN1-212ENST00000555254 FGF17O60258 216 aa16.51■□□□□ 0.23
PSEN1-212ENST00000555254 LDB3O75112 727 aa16.51■□□□□ 0.23
PSEN1-212ENST00000555254 SLC35E2P0CK97 266 aa16.51■□□□□ 0.23
PSEN1-212ENST00000555254 FGF5P12034 268 aa16.51■□□□□ 0.23
PSEN1-212ENST00000555254 GGT1P19440 569 aa16.51■□□□□ 0.23
PSEN1-212ENST00000555254 GCGRP47871 477 aa16.51■□□□□ 0.23
PSEN1-212ENST00000555254 PRKAG1P54619 331 aa16.51■□□□□ 0.23
PSEN1-212ENST00000555254 RBBP4Q09028 425 aa16.51■□□□□ 0.23
PSEN1-212ENST00000555254 CLN3Q13286 438 aa16.51■□□□□ 0.23
PSEN1-212ENST00000555254 SERTAD2Q14140 314 aa16.51■□□□□ 0.23
PSEN1-212ENST00000555254 SNCBQ16143 134 aa16.51■□□□□ 0.23
PSEN1-212ENST00000555254 BROXQ5VW32 411 aa16.51■□□□□ 0.23
PSEN1-212ENST00000555254 RHBDD2Q6NTF9 364 aa16.51■□□□□ 0.23
PSEN1-212ENST00000555254 SPPL2CQ8IUH8 684 aa16.51■□□□□ 0.23
PSEN1-212ENST00000555254 SLC30A8Q8IWU4 369 aa16.51■□□□□ 0.23
PSEN1-212ENST00000555254 DTWD1Q8N5C7 304 aa16.51■□□□□ 0.23
PSEN1-212ENST00000555254 GOLM1Q8NBJ4 401 aa16.51■□□□□ 0.23
PSEN1-212ENST00000555254 C11orf65Q8NCR3 313 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms