RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 HDHD5Q9BXW7 423 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 POLDIP3Q9BY77 421 aaKnown RBP10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 SPNS1Q9H2V7 528 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 TDP1Q9NUW8 608 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 MAT2BQ9NZL9 334 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 TNFRSF10DQ9UBN6 386 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 REV1Q9UBZ9 1251 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 IL36AQ9UHA7 158 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 CLEC2DQ9UHP7 191 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 CDH10Q9Y6N8 788 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 U3KQ87 197 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 PRAMEF25A6NGN4 478 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 E7EQ34 232 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 INMT-MINDY4F8WBC2 141 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 M0R129 80 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 FAAHO00519 579 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 SLC9A3R1O14745 358 aaPredicted RBP10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 AKR7A2O43488 359 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 MTX2O75431 263 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 OR7A10O76100 309 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 TPOP07202 933 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 CD22P20273 847 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 GABRA5P31644 462 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 ETV3P41162 512 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 CRATP43155 626 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 EVX1P49640 407 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 MAN2A2P49641 1150 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 WNT4P56705 351 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 SMIM11AP58511 58 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 NDUFA9Q16795 377 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 KLHL12Q53G59 568 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 ARSIQ5FYB1 569 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 LRRC73Q5JTD7 316 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 FAM205BPQ63HN1 556 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 TMEM107Q6UX40 140 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 USP30Q70CQ3 517 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 TMEM145Q8NBT3 493 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 UPRTQ96BW1 309 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 CHFRQ96EP1 664 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 RADILQ96JH8 1075 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 ACAT2Q9BWD1 397 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 LIN7BQ9HAP6 207 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 C1GALT1Q9NS00 363 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 SAGE1Q9NXZ1 904 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 TAS2R7Q9NYW3 318 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 GULP1Q9UBP9 304 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 SLC23A1Q9UHI7 598 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 MOSPD1Q9UJG1 213 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 SLC6A14Q9UN76 642 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 CCL26Q9Y258 94 aa10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 SF3B6Q9Y3B4 125 aaKnown RBP10.14□□□□□ -0.79
MTHFD1-210ENST00000555252 TRDV1A0A1B0GX56 115 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 PIPSLA2A3N6 862 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 MGAT4DA6NG13 374 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 OR2AG2A6NM03 316 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 FAM170BA6NMN3 283 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 TSPAN6O43657 245 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 PLXNA2O75051 1894 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 ANXA4P09525 319 aaPredicted RBP10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 TNNI3P19429 210 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 GALP22466 123 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 CCR2P41597 374 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 OR1E2P47887 323 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 INPP1P49441 399 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 ATP12AP54707 1039 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 CLLU1Q5K131 121 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 C22orf42Q6IC83 251 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 ANKRD54Q6NXT1 300 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 MED27Q6P2C8 311 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 CNIH2Q6PI25 160 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 UNC5DQ6UXZ4 953 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 TRILQ7L0X0 811 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 PRICKLE2Q7Z3G6 844 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 CDH24Q86UP0 819 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 LINC00471Q8N535 108 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 LRRC17Q8N6Y2 441 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 RASGEF1AQ8N9B8 481 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 SLC37A3Q8NCC5 494 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 OR8H1Q8NGG4 311 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 LHFPL5Q8TAF8 219 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 WFIKKN2Q8TEU8 576 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 ACOT12Q8WYK0 555 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 UFD1Q92890 307 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 WDR34Q96EX3 536 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 MED8Q96G25 268 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 MRGPRX3Q96LB0 322 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 SLC6A18Q96N87 628 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 UBL7Q96S82 380 aaPredicted RBP10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 PKP4Q99569 1192 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 C1QTNF7Q9BXJ2 289 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 PRRG3Q9BZD7 231 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 ZCCHC2Q9C0B9 1178 aaKnown RBP10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 FGF20Q9NP95 211 aaPredicted RBP10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 TESQ9UGI8 421 aaKnown RBP10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 IRAK3Q9Y616 596 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 NINQ8N4C6 2090 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 C7orf66A4D0T2 115 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 NRG2O14511 850 aaPredicted RBP10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 PRKYO43930 277 aa10.13□□□□□ -0.79
MTHFD1-210ENST00000555252 OPN1SWP03999 348 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms