RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 FAM199XQ6PEV8 388 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-216ENST00000554975 TMPRSS11BQ86T26 416 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 STK32CQ86UX6 486 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 AMZ2Q86W34 360 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 ZNF547Q8IVP9 402 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 DCUN1D3Q8IWE4 304 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 SYTL1Q8IYJ3 562 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 SLC34A3Q8N130 599 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 KRT78Q8N1N4 520 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 PIAS4Q8N2W9 510 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-216ENST00000554975 AVL9Q8NBF6 648 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 CLHC1Q8NHS4 586 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 HDAC2Q92769 488 aaKnown RBP10.5□□□□□ -0.73
SHMT2-216ENST00000554975 SH3KBP1Q96B97 665 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 PYCR2Q96C36 320 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 APIPQ96GX9 242 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 PYURFQ96I23 114 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 DUSP26Q9BV47 211 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 NUDT9Q9BW91 350 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 SGPP1Q9BX95 441 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 BHLHE41Q9C0J9 482 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-216ENST00000554975 PITHD1Q9GZP4 211 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-216ENST00000554975 PCBD2Q9H0N5 130 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 ATG10Q9H0Y0 220 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 SLAMF7Q9NQ25 335 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 LHX9Q9NQ69 397 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 SPATA7Q9P0W8 599 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 CPNE7Q9UBL6 633 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 PCDHB14Q9Y5E9 798 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 DNMT3AQ9Y6K1 912 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-216ENST00000554975 HSPE1-MOB4S4R3N1 261 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 V9GYQ6 96 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 CLIC1O00299 241 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 RNASET2O00584 256 aaKnown RBP10.49□□□□□ -0.73
SHMT2-216ENST00000554975 DLGAP1O14490 977 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 POP7O75817 140 aaKnown RBP10.49□□□□□ -0.73
SHMT2-216ENST00000554975 CEACAM4O75871 244 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 SEMA3DO95025 777 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 C1orf105O95561 183 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 RECKO95980 971 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 SERPINA1P01009 418 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 C9P02748 559 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 ABCB1P08183 1280 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-216ENST00000554975 GPX2P18283 190 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 CXCR2P25025 360 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 PCGF2P35227 344 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 CLCNKAP51800 687 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 NUP107P57740 925 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 PPP2R2BQ00005 443 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 RBBP4Q09028 425 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 DDX39BQ13838 428 aaKnown RBP10.49□□□□□ -0.73
SHMT2-216ENST00000554975 UGT8Q16880 541 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 KRTAP21-3Q3LHN1 58 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 CPTPQ5TA50 214 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 OR4F3Q6IEY1 312 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 TMEM214Q6NUQ4 689 aaKnown RBP10.49□□□□□ -0.73
SHMT2-216ENST00000554975 SHQ1Q6PI26 577 aaKnown RBP10.49□□□□□ -0.73
SHMT2-216ENST00000554975 ZNF773Q6PK81 442 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 LCTLQ6UWM7 567 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 TMEM26Q6ZUK4 368 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 THAP5Q7Z6K1 395 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 ERI1Q8IV48 349 aaKnown RBP10.49□□□□□ -0.73
SHMT2-216ENST00000554975 MCEMP1Q8IX19 187 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 LAS2Q8IYD9 372 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 METTL25Q8N6Q8 603 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 FDCSPQ8NFU4 85 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 OR9A1PQ8NGU1 263 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 PNPLA2Q96AD5 504 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 RAD51AP1Q96B01 352 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 TBCDQ9BTW9 1192 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-216ENST00000554975 TRIM8Q9BZR9 551 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 MYNNQ9NPC7 610 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 ADPRHL2Q9NX46 363 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 AHSPQ9NZD4 102 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 SCHIP1Q9P0W5 487 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-216ENST00000554975 ATP6V1HQ9UI12 483 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 PADI1Q9ULC6 663 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 PCDHGB4Q9UN71 923 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 ENTPD4Q9Y227 616 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 ZNF451Q9Y4E5 1061 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 SPG11Q96JI7 2443 aa10.49□□□□□ -0.73
SHMT2-216ENST00000554975 GNG14A0A1W2PPG7 69 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 ANKUB1A6NFN9 424 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 OR52A4PA6NMU1 304 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 PCDH7O60245 1069 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 MRPS14O60783 128 aaKnown RBP10.48□□□□□ -0.73
SHMT2-216ENST00000554975 PRKD3O94806 890 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 FKBP9O95302 570 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 SLC16A8O95907 504 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 IFNA14P01570 189 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 FABP3P05413 133 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 ANXA4P09525 319 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-216ENST00000554975 C1GALT1C1LP0DN25 315 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 PCNAP12004 261 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 FGF5P12034 268 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 TYRP1P17643 537 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 FPR1P21462 350 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 PTPN6P29350 595 aa10.48□□□□□ -0.73
SHMT2-216ENST00000554975 PREPP48147 710 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms