RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 UGT1A4P22310 534 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 IL4RP24394 825 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 CYP2F1P24903 491 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 MAT2AP31153 395 aaKnown RBP2.55□□□□□ -2
SCFD1-213ENST00000554776 FCGR2BP31994 310 aaPredicted RBP2.55□□□□□ -2
SCFD1-213ENST00000554776 FCGR2CP31995 323 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 ASMTP46597 345 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 ATP4BP51164 291 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 CRYBA2P53672 197 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 FKBP3Q00688 224 aaKnown RBP2.55□□□□□ -2
SCFD1-213ENST00000554776 PRKCEQ02156 737 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 NME3Q13232 169 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 FASTKD3Q14CZ7 662 aaKnown RBP2.55□□□□□ -2
SCFD1-213ENST00000554776 EMC2Q15006 297 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 HKDC1Q2TB90 917 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 TTC31Q49AM3 519 aaPredicted RBP2.55□□□□□ -2
SCFD1-213ENST00000554776 C2CD6Q53TS8 623 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 IL23RQ5VWK5 629 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 GALNT17Q6IS24 598 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 REG3GQ6UW15 175 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 FAM159AQ6UWV7 190 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 OLFM4Q6UX06 510 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 SYVN1Q86TM6 617 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 ADCK1Q86TW2 530 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 LUZP1Q86V48 1076 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 ZFAND4Q86XD8 727 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 PYROXD2Q8N2H3 581 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 GVQW1Q8N7I0 195 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 MLKLQ8NB16 471 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 ZNF397Q8NF99 534 aaPredicted RBP2.55□□□□□ -2
SCFD1-213ENST00000554776 OR4F17Q8NGA8 305 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 OR1K1Q8NGR3 316 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 CCDC110Q8TBZ0 833 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 RDH11Q8TC12 318 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 FBXO25Q8TCJ0 367 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 PTPRUQ92729 1446 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 ANKRD9Q96BM1 317 aaPredicted RBP2.55□□□□□ -2
SCFD1-213ENST00000554776 OR4F4Q96R69 305 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 VGLL1Q99990 258 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 TRIM51Q9BSJ1 452 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 CCDC28BQ9BUN5 200 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 ATG10Q9H0Y0 220 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 PARLQ9H300 379 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 PCNX3Q9H6A9 2034 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 COQ10BQ9H8M1 238 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 IL1RL2Q9HB29 575 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 NMUR1Q9HB89 426 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 PALMDQ9NP74 551 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 NDE1Q9NXR1 346 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 CGNQ9P2M7 1197 aaKnown RBP2.55□□□□□ -2
SCFD1-213ENST00000554776 ANKMY1Q9P2S6 941 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 SH3BGRL2Q9UJC5 107 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 NOTCH3Q9UM47 2321 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 FKBP7Q9Y680 259 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 AFF2P51816 1311 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 IGHV4-30-2A0A087WSY4 118 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 A0A0U1RQV5 110 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 TEX48A0A1B0GUV7 120 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 A8MXK9 166 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 K7EQG2 157 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 LGALS8O00214 317 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 PDHXO00330 501 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 SOCS3O14543 225 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 RANBP6O60518 1105 aaKnown RBP2.54□□□□□ -2
SCFD1-213ENST00000554776 TSPAN2O60636 221 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 APBB3O95704 486 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 POP4O95707 220 aaKnown RBP2.54□□□□□ -2
SCFD1-213ENST00000554776 AK1P00568 194 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 HEXBP07686 556 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 TRIM49P0CI25 452 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 TRIM49CP0CI26 452 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 RALAP11233 206 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 RFC2P35250 354 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 SLC6A8P48029 635 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 SGSHP51688 502 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 NDST1P52848 882 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 NAAAQ02083 359 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 NFATC2Q13469 925 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 SNX1Q13596 522 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 ENPP2Q13822 863 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 DPYSQ14117 519 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 LY6DQ14210 128 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 SIX1Q15475 284 aaPredicted RBP2.54□□□□□ -2
SCFD1-213ENST00000554776 SLC1A5Q15758 541 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 ZNF699Q32M78 642 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 MS4A18Q3C1V0 323 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 ADPRMQ3LIE5 342 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 KRT71Q3SY84 523 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 USH1GQ495M9 461 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 DDI2Q5TDH0 399 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 C1orf189Q5VU69 101 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 WDR25Q64LD2 544 aaPredicted RBP2.54□□□□□ -2
SCFD1-213ENST00000554776 SULT1C3Q6IMI6 304 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 DOK6Q6PKX4 331 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 CWC27Q6UX04 472 aaKnown RBP2.54□□□□□ -2
SCFD1-213ENST00000554776 DPY19L2P2Q6ZN68 376 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 PRSS48Q7RTY5 328 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 GPBP1Q86WP2 473 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 CARM1Q86X55 608 aa2.54□□□□□ -2
SCFD1-213ENST00000554776 FAM131BQ86XD5 332 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms