RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 UROSP10746 265 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 EPB42P16452 691 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 TLE4Q04727 773 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 PCDH1Q08174 1060 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 SF3A3Q12874 501 aaKnown RBP eCLIP9.79□□□□□ -0.841e-13■■■□□ 16.4
SHMT2-215ENST00000554656 GTF2H2Q13888 395 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 DOC2AQ14183 400 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 ELAVL1Q15717 326 aaKnown RBP9.79□□□□□ -0.84
SHMT2-215ENST00000554656 KANK2Q63ZY3 851 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 GTF2H2CQ6P1K8 395 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 IL20RBQ6UXL0 311 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 GPRIN3Q6ZVF9 776 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 GOLGA7Q7Z5G4 137 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 MTDHQ86UE4 582 aaKnown RBP9.79□□□□□ -0.84
SHMT2-215ENST00000554656 ZNF595Q8IYB9 648 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 KRT78Q8N1N4 520 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 OR2M7Q8NG81 312 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 CEP70Q8NHQ1 597 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 TRPC4APQ8TEL6 797 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 CA5BP1Q8WTZ4 195 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 ERP27Q96DN0 273 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 WDR34Q96EX3 536 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 RASL10BQ96S79 203 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 SERINC2Q96SA4 455 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 EBF4Q9BQW3 602 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 UCK2Q9BZX2 261 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 REXO4Q9GZR2 422 aaKnown RBP9.79□□□□□ -0.84
SHMT2-215ENST00000554656 DEFB127Q9H1M4 99 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 EHD1Q9H4M9 534 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 ZDHHC11Q9H8X9 412 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 MCCC2Q9HCC0 563 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 MID1IP1Q9NPA3 183 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 TIMMDC1Q9NPL8 285 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 DNAJC11Q9NVH1 559 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 GPRC5BQ9NZH0 403 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 MYOTQ9UBF9 498 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 TRPS1Q9UHF7 1281 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 SLC12A4Q9UP95 1085 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 RNF6Q9Y252 685 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 YARS2Q9Y2Z4 477 aaKnown RBP9.79□□□□□ -0.84
SHMT2-215ENST00000554656 ANGPTL3Q9Y5C1 460 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 NF1P21359 2839 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 EXPH5Q8NEV8 1989 aa9.79□□□□□ -0.84
SHMT2-215ENST00000554656 AKAP6Q13023 2319 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 HRNRQ86YZ3 2850 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-215ENST00000554656 NINQ8N4C6 2090 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 ANKDD1BA6NHY2 528 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 LRRC14BA6NHZ5 514 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 FAM90A27PA6NNH2 459 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 A8MVJ9 347 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 RTCAO00442 366 aaKnown RBP9.78□□□□□ -0.84
SHMT2-215ENST00000554656 CLDN4O14493 209 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 UGDHO60701 494 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 DIAPH2O60879 1101 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 LDB3O75112 727 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 ZFAND5O76080 213 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 TOXO94900 526 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 GLSO94925 669 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-215ENST00000554656 ETHE1O95571 254 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 PCSK2P16519 638 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 GSTM2P28161 218 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 PRDX6P30041 224 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 RASSF2P50749 326 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 CCNG1P51959 295 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 MTTPP55157 894 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 CDH13P55290 713 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 NUP107P57740 925 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 ID2Q02363 134 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 FOXO1Q12778 655 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 E2F2Q14209 437 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 ZNF750Q32MQ0 723 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 UGT3A2Q3SY77 523 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 GGTA1PQ4G0N0 100 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 GLIPR1L2Q4G1C9 344 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 SLC9B1Q4ZJI4 515 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 TRIM40Q6P9F5 258 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 CDH24Q86UP0 819 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 CCDC71Q8IV32 467 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-215ENST00000554656 SNX31Q8N9S9 440 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 ASB15Q8WXK1 588 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 ANKRD9Q96BM1 317 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-215ENST00000554656 PTCD3Q96EY7 689 aaKnown RBP9.78□□□□□ -0.84
SHMT2-215ENST00000554656 NSUN5Q96P11 429 aaKnown RBP9.78□□□□□ -0.84
SHMT2-215ENST00000554656 MAPKAP1Q9BPZ7 522 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 MS4A8Q9BY19 250 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 ALOXE3Q9BYJ1 711 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 TTTY12Q9BZ98 90 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 PITHD1Q9GZP4 211 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-215ENST00000554656 SEMA4BQ9NPR2 832 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-215ENST00000554656 PNPLA3Q9NST1 481 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 HPF1Q9NWY4 346 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 ERVK-11Q9UQG0 969 aa9.78□□□□□ -0.84
SHMT2-215ENST00000554656 CCNT2O60583 730 aaKnown RBP9.77□□□□□ -0.85
SHMT2-215ENST00000554656 CTNSO60931 367 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 CRCPO75575 148 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 SCELO95171 688 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 IFNA16P05015 189 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 CELA3AP09093 270 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 CCL3P10147 92 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 CALB2P22676 271 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms