RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 LHFPL4Q7Z7J7 247 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 GPR180Q86V85 440 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 TMPRSS6Q8IU80 811 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 ZNF295-AS1Q8N0V1 137 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 UBE2J2Q8N2K1 259 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 LIX1Q8N485 282 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 ZCCHC9Q8N567 271 aaKnown RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 RASGEF1AQ8N9B8 481 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 OR5D18Q8NGL1 313 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 RAB1CQ92928 201 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 EID2BQ96D98 161 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 PBKQ96KB5 322 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 C4orf36Q96KX1 117 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 ZNF597Q96LX8 424 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 PRRC1Q96M27 445 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 DERL2Q9GZP9 239 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 ZNF350Q9GZX5 532 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 SLC22A4Q9H015 551 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 SLCO5A1Q9H2Y9 848 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 COG4Q9H9E3 785 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 NHEJ1Q9H9Q4 299 aaPredicted RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 NMUR1Q9HB89 426 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 ABCB9Q9NP78 766 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 CHST11Q9NPF2 352 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 ASCL3Q9NQ33 180 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 G6PC2Q9NQR9 355 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 NECTIN3Q9NQS3 549 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 KLHL1Q9NR64 748 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 C20orf96Q9NUD7 363 aaPredicted RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 NDE1Q9NXR1 346 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 KLHL28Q9NXS3 571 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 KLHL8Q9P2G9 620 aaPredicted RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 STOML1Q9UBI4 398 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 HEY2Q9UBP5 337 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 EMC9Q9Y3B6 208 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 GMPPBQ9Y5P6 360 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 SNX11Q9Y5W9 270 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 CSNK1G3Q9Y6M4 447 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 ITPR1Q14643 2758 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 TRAV25A0A0B4J276 109 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 A0A1B0GTH6 734 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 A0A1B0GVT2 93 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 GNG14A0A1W2PPG7 69 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 PLSCR5A0PG75 271 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 CDRT15L2A8MXV6 281 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 ISM1B1AKI9 464 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 KDM4EB2RXH2 506 aaPredicted RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 H0Y8X5 98 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 J3QKU1 62 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 CLDN5O00501 218 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 TSPAN4O14817 238 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 CYP26A1O43174 497 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 DENRO43583 198 aaKnown RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 PLRG1O43660 514 aaKnown RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 SERPINB7O75635 380 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 KRT36O76013 467 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 TM7SF2O76062 418 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 SUN1O94901 812 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 APOL3O95236 402 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 IGLV3-25P01717 112 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 WNT1P04628 370 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 CYBBP04839 570 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 DBTP11182 482 aaKnown RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 NID1P14543 1247 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 SERPINA4P29622 427 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 CD80P33681 288 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 CEACAM3P40198 252 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 GPD2P43304 727 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 MAGEB1P43366 347 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 NPY2RP49146 381 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 KPNA2P52292 529 aaKnown RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 NDST1P52848 882 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 GALCP54803 685 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 MANFP55145 182 aaKnown RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 ATP5IP56385 69 aaPredicted RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 TMPRSS3P57727 454 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 CXCR4P61073 352 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 PSME3P61289 254 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 PSPHP78330 225 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 TLE3Q04726 772 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 SLC13A2Q13183 592 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 GRM7Q14831 915 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 EXT1Q16394 746 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 EDRF1Q3B7T1 1238 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 WDR72Q3MJ13 1102 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 CCDC58Q4VC31 144 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 LBHQ53QV2 105 aaPredicted RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 YIF1BQ5BJH7 314 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 BRMS1LQ5PSV4 323 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 C9orf64Q5T6V5 341 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 PLCXD3Q63HM9 321 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 MRNIPQ6NTE8 343 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 GJB7Q6PEY0 223 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 PODNL1Q6PEZ8 512 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 INO80CQ6PI98 192 aaPredicted RBP2.56□□□□□ -2
PRPF39-206ENST00000554429 IDO2Q6ZQW0 420 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 LRRC74BQ6ZQY2 392 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 COLCA1Q6ZS62 124 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 KCTD8Q6ZWB6 473 aa2.56□□□□□ -2
PRPF39-206ENST00000554429 MED25Q71SY5 747 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms