RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 RAB40CQ96S21 281 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 RUFY1Q96T51 708 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 NAP1L3Q99457 506 aaPredicted RBP4.24□□□□□ -1.73
CHD8-207ENST00000554384 VGLL1Q99990 258 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 ABCG8Q9H221 673 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 SLC26A1Q9H2B4 701 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 TMEM245Q9H330 911 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 SLC25A19Q9HC21 320 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 COPS7AQ9UBW8 275 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 IL19Q9UHD0 177 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 DIMT1Q9UNQ2 313 aaKnown RBP4.24□□□□□ -1.73
CHD8-207ENST00000554384 NIP7Q9Y221 180 aaKnown RBP eCLIP4.24□□□□□ -1.73
CHD8-207ENST00000554384 KIF1AQ12756 1690 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 BRD4O60885 1362 aaPredicted RBP4.24□□□□□ -1.73
CHD8-207ENST00000554384 PAPPAQ13219 1627 aa4.24□□□□□ -1.73
CHD8-207ENST00000554384 CRB1P82279 1406 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 NDUFAF8A1L188 74 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 SLC9B1P1A6NJY1 282 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 YJEFN3A6XGL0 299 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 ARHGEF33A8MVX0 844 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 KPNA7A9QM74 516 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 EPM2AB3EWF7 344 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 NEDD8-MDP1E9PL57 170 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 KIAA0513O60268 411 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 PRDM1O75626 825 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 FHP07954 510 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 CT45A8P0DMV1 189 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 CT45A9P0DMV2 189 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 PKLRP30613 574 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 NLRP11P59045 1033 aaKnown RBP4.23□□□□□ -1.73
CHD8-207ENST00000554384 ERVK-16P61578 105 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 FKBP3Q00688 224 aaKnown RBP4.23□□□□□ -1.73
CHD8-207ENST00000554384 RIGQ13278 110 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 MEF2DQ14814 521 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 SLC17A1Q14916 467 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 GPAT3Q53EU6 434 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 C2CD6Q53TS8 623 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 CT45A2Q5DJT8 189 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 CMPK2Q5EBM0 449 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 LIPJQ5W064 366 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 OR6B2Q6IFH4 312 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 ZNF613Q6PF04 617 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 BNIPLQ7Z465 357 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 ZNF619Q8N2I2 560 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 ZNRF1Q8ND25 227 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 CHPT1Q8WUD6 406 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 CCDC47Q96A33 483 aaKnown RBP4.23□□□□□ -1.73
CHD8-207ENST00000554384 NABP1Q96AH0 204 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 C16orf58Q96GQ5 468 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 COG3Q96JB2 828 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 AGAP3Q96P47 875 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 LGMNQ99538 433 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 CABLES2Q9BTV7 478 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 MCRIP2Q9BUT9 160 aaKnown RBP4.23□□□□□ -1.73
CHD8-207ENST00000554384 GANQ9H2C0 597 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 TNMDQ9H2S6 317 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 LIME1Q9H400 295 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 ACOXLQ9NUZ1 547 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 PLEKHG2Q9H7P9 1386 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 NPC1L1Q9UHC9 1359 aa4.23□□□□□ -1.73
CHD8-207ENST00000554384 SALL1Q9NSC2 1324 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 USP6P35125 1406 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 LRRC37A3O60309 1634 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 IGHV4-30-2A0A087WSY4 118 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 TMEM89A2RUT3 159 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 ZNF724A8MTY0 619 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 KRTAP16-1A8MUX0 517 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 K7EQG2 157 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 OR6B1O95007 311 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 ALPPP05187 535 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 ADORA3P0DMS8 318 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 ALPPL2P10696 532 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 PCP11498 1178 aaKnown RBP4.22□□□□□ -1.73
CHD8-207ENST00000554384 TRIM23P36406 574 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 RABIFP47224 123 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 ATP4BP51164 291 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 ERVK11-1P61568 191 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 WASHC5Q12768 1159 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 EXOSC7Q15024 291 aaKnown RBP4.22□□□□□ -1.73
CHD8-207ENST00000554384 P2RY14Q15391 338 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 TRADDQ15628 312 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 UPP1Q16831 310 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 TEX35Q5T0J7 233 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 NKAIN2Q5VXU1 208 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 RTL6Q6ICC9 239 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 DLEU7Q6UYE1 221 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 Q6ZRG5 221 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 CARM1Q86X55 608 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 TBC1D10CQ8IV04 446 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 OR6M1Q8NGM8 313 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 SPPL2AQ8TCT8 520 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 SLC13A3Q8WWT9 602 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 C11orf52Q96A22 123 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 RAB39BQ96DA2 213 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 RPGRIP1Q96KN7 1286 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 RCHY1Q96PM5 261 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 CCDC28BQ9BUN5 200 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 LRRC61Q9BV99 259 aa4.22□□□□□ -1.73
CHD8-207ENST00000554384 DDX47Q9H0S4 455 aaKnown RBP4.22□□□□□ -1.73
CHD8-207ENST00000554384 SIRPDQ9H106 197 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms