RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 ADRA1AP35348 466 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 SLC1A3P43003 542 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 CHRNA4P43681 627 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 GCGRP47871 477 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 AGTR2P50052 363 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 SUOXP51687 545 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 CLDN8P56748 225 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 CDC42P60953 191 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 PPIGQ13427 754 aaKnown RBP eCLIP9.07□□□□□ -0.96
SIX4-202ENST00000554079 MELKQ14680 651 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 SSPNQ14714 243 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 NCF4Q15080 339 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 UAP1L1Q3KQV9 507 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 MINDY4Q4G0A6 757 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 RFTN2Q52LD8 501 aaPredicted RBP9.07□□□□□ -0.96
SIX4-202ENST00000554079 HACD4Q5VWC8 232 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 MZT2AQ6P582 158 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 ZC3H14Q6PJT7 736 aaKnown RBP9.07□□□□□ -0.96
SIX4-202ENST00000554079 LYPD4Q6UWN0 246 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 GSG1LQ6UXU4 331 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 IKBIPQ70UQ0 350 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 CIR1Q86X95 450 aaPredicted RBP9.07□□□□□ -0.96
SIX4-202ENST00000554079 ZDHHC17Q8IUH5 632 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 CILP2Q8IUL8 1156 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 CHST14Q8NCH0 376 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 TMIEQ8NEW7 156 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 CMTM3Q96MX0 182 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 LMAN2LQ9H0V9 348 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 CLMPQ9H6B4 373 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 TMEM134Q9H6X4 195 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 GDE1Q9NZC3 331 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 TCEAL9Q9UHQ7 104 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 SNX11Q9Y5W9 270 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 IRAK3Q9Y616 596 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 PHIPQ8WWQ0 1821 aa9.07□□□□□ -0.96
SIX4-202ENST00000554079 A0A1B0GW55 424 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 TGM5O43548 720 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 MPZL2O60487 215 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 PEX10O60683 326 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 NCR1O76036 304 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 JCHAINP01591 159 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 GIPP09681 153 aaPredicted RBP9.06□□□□□ -0.96
SIX4-202ENST00000554079 DUX4L2P0CJ85 424 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 DUX4L3P0CJ86 424 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 DUX4L4P0CJ87 422 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 DUX4L5P0CJ88 424 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 DUX4L6P0CJ89 424 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 DUX4L7P0CJ90 424 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 ANXA8P13928 327 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 SDHBP21912 280 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 FGF9P31371 208 aaPredicted RBP9.06□□□□□ -0.96
SIX4-202ENST00000554079 KDELR2P33947 212 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 IRS1P35568 1242 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 CD79BP40259 229 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 SRP9P49458 86 aaKnown RBP9.06□□□□□ -0.96
SIX4-202ENST00000554079 ERVPABLB-1P60509 514 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 RAB4BP61018 213 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 KCNJ10P78508 379 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 FABP5Q01469 135 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 IRF4Q15306 451 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 RBBP7Q16576 425 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 TMEM201Q5SNT2 666 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 MANEAQ5SRI9 462 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 C10orf91Q5T1B1 145 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 PRAMEF18Q5VWM3 479 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 OVOS1Q6IE37 1185 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 SLC30A6Q6NXT4 461 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 CASP12Q6UXS9 341 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 Q6ZTK2 550 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 PTCHD4Q6ZW05 846 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 REC114Q7Z4M0 266 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 NAA40Q86UY6 237 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 VSIG10LQ86VR7 867 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 C7orf31Q8N865 590 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 SP7Q8TDD2 431 aaPredicted RBP9.06□□□□□ -0.96
SIX4-202ENST00000554079 SLC35F5Q8WV83 523 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 KAT2AQ92830 837 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 OSMRQ99650 979 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 TINF2Q9BSI4 451 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 SOX7Q9BT81 388 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 CHIAQ9BZP6 476 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 SPRTNQ9H040 489 aaPredicted RBP9.06□□□□□ -0.96
SIX4-202ENST00000554079 PORCNQ9H237 461 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 OPA3Q9H6K4 179 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 MINDY3Q9H8M7 445 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 NTMQ9P121 344 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 ZNF624Q9P2J8 865 aaPredicted RBP9.06□□□□□ -0.96
SIX4-202ENST00000554079 RPS6KB2Q9UBS0 482 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 DUX4Q9UBX2 424 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 FKBPLQ9UIM3 349 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 HACL1Q9UJ83 578 aa9.06□□□□□ -0.96
SIX4-202ENST00000554079 SHISA3A0PJX4 238 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 RHPN2P1A8MT19 583 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 A8MVJ9 347 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 TNFRSF11BO00300 401 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 CLDN4O14493 209 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 CASKO14936 926 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 EEF1E1O43324 174 aaKnown RBP9.05□□□□□ -0.96
SIX4-202ENST00000554079 ECI2O75521 394 aa9.05□□□□□ -0.96
SIX4-202ENST00000554079 CDC123O75794 336 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 945.4 ms