RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 ARMC10Q8N2F6 343 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 NKAPQ8N5F7 415 aaKnown RBP8.19□□□□□ -1.1
TDP1-208ENST00000553989 ACBD4Q8NC06 268 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 RBM15BQ8NDT2 890 aaKnown RBP8.19□□□□□ -1.1
TDP1-208ENST00000553989 OR2M7Q8NG81 312 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 NRGNQ92686 78 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 DAZLQ92904 295 aaKnown RBP8.19□□□□□ -1.1
TDP1-208ENST00000553989 SPDL1Q96EA4 605 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 RASL10BQ96S79 203 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 SERPINI1Q99574 410 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 TREX2Q9BQ50 279 aaPredicted RBP8.19□□□□□ -1.1
TDP1-208ENST00000553989 THTPAQ9BU02 230 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 NPLQ9BXD5 320 aaPredicted RBP8.19□□□□□ -1.1
TDP1-208ENST00000553989 OR8D2Q9GZM6 311 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 REXO4Q9GZR2 422 aaKnown RBP8.19□□□□□ -1.1
TDP1-208ENST00000553989 DEPPQ9NTK1 212 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 WWOXQ9NZC7 414 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 MYOTQ9UBF9 498 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 TNFRSF10DQ9UBN6 386 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 KCNN3Q9UGI6 736 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 ZNF223Q9UK11 482 aaPredicted RBP8.19□□□□□ -1.1
TDP1-208ENST00000553989 IKZF3Q9UKT9 509 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 ACAD8Q9UKU7 415 aa8.19□□□□□ -1.1
TDP1-208ENST00000553989 A0A0G2JMM0 328 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 FAM95CA0A1B0GW59 222 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 ATP6AP2A0A1C7CYW4 349 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 A0A1W2PPB8 328 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 A0A1W2PRS3 328 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 OR14I1A6ND48 311 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 SYNDIG1LA6NDD5 238 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 KIR3DP1A8MWS1 328 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 RNF223E7ERA6 249 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 H0Y3Z8 333 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 ATP6AP2O75787 350 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 ALDOAP04075 364 aaKnown RBP8.18□□□□□ -1.1
TDP1-208ENST00000553989 P04436 131 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 HOXD4P09016 255 aaPredicted RBP8.18□□□□□ -1.1
TDP1-208ENST00000553989 SMIM10L1P0DMW3 83 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 C1GALT1C1LP0DN25 315 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 CD99P14209 185 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 ANPEPP15144 967 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 CERS1P27544 350 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 GSTM2P28161 218 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 CRABP2P29373 138 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 GDF5P43026 501 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 MAGEA5P43359 124 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 ZFP36L2P47974 494 aaKnown RBP8.18□□□□□ -1.1
TDP1-208ENST00000553989 MAN2A2P49641 1150 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 HNMTP50135 292 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 GPR143P51810 404 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 NR0B1P51843 470 aaKnown RBP8.18□□□□□ -1.1
TDP1-208ENST00000553989 HNRNPFP52597 415 aaKnown RBP8.18□□□□□ -1.1
TDP1-208ENST00000553989 SLC12A2P55011 1212 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 MTTPP55157 894 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 SH3BGRP55822 239 aaPredicted RBP8.18□□□□□ -1.1
TDP1-208ENST00000553989 TFF3Q07654 80 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 TGM3Q08188 693 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 ZNF460Q14592 562 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 ELAVL1Q15717 326 aaKnown RBP8.18□□□□□ -1.1
TDP1-208ENST00000553989 PPP1R3AQ16821 1122 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 ZNF750Q32MQ0 723 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 XKR6Q5GH73 641 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 NDUFAF5Q5TEU4 345 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 C1orf146Q5VVC0 180 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 PGM2L1Q6PCE3 622 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 EPGNQ6UW88 154 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 WDR53Q7Z5U6 358 aaPredicted RBP8.18□□□□□ -1.1
TDP1-208ENST00000553989 ADAMTSL2Q86TH1 951 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 TREML1Q86YW5 311 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 FAM109AQ8N4B1 249 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 SNX31Q8N9S9 440 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 TMEM52Q8NDY8 209 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 CHDHQ8NE62 594 aaPredicted RBP8.18□□□□□ -1.1
TDP1-208ENST00000553989 OR14A16Q8NHC5 309 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 ACTRT2Q8TDY3 377 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 MS4A6EQ96DS6 147 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 SMIM10Q96HG1 83 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 VPS39Q96JC1 886 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 SERINC2Q96SA4 455 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 CSF3RQ99062 836 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 ZNF184Q99676 751 aaPredicted RBP8.18□□□□□ -1.1
TDP1-208ENST00000553989 RBBP8Q99708 897 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 FAM173AQ9BQD7 235 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 MECRQ9BV79 373 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 AICDAQ9GZX7 198 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 NMRAL1Q9HBL8 299 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 S100A14Q9HCY8 104 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 SACM1LQ9NTJ5 587 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 ZNF358Q9NW07 568 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 DNAJB12Q9NXW2 375 aaKnown RBP8.18□□□□□ -1.1
TDP1-208ENST00000553989 NDUFA13Q9P0J0 144 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 ARMCX1Q9P291 453 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 COPS7AQ9UBW8 275 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 PPIEQ9UNP9 301 aaKnown RBP8.18□□□□□ -1.1
TDP1-208ENST00000553989 OARD1Q9Y530 152 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 LIPGQ9Y5X9 500 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 SPACA6W5XKT8 324 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 CELSR1Q9NYQ6 3014 aa8.18□□□□□ -1.1
TDP1-208ENST00000553989 HIVEP1P15822 2718 aa8.17□□□□□ -1.1
TDP1-208ENST00000553989 INTS1Q8N201 2190 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms