RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 FAM83HQ6ZRV2 1179 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-207ENST00000553837 NRSN1Q8IZ57 195 aa11.62□□□□□ -0.55
SHMT2-207ENST00000553837 NAGSQ8N159 534 aa11.62□□□□□ -0.55
SHMT2-207ENST00000553837 LILRB2Q8N423 598 aa11.62□□□□□ -0.55
SHMT2-207ENST00000553837 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-207ENST00000553837 ZNF740Q8NDX6 193 aa11.62□□□□□ -0.55
SHMT2-207ENST00000553837 OR4K1Q8NGD4 311 aa11.62□□□□□ -0.55
SHMT2-207ENST00000553837 WDR36Q8NI36 951 aaKnown RBP11.62□□□□□ -0.55
SHMT2-207ENST00000553837 SP7Q8TDD2 431 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-207ENST00000553837 UTP15Q8TED0 518 aaKnown RBP11.62□□□□□ -0.55
SHMT2-207ENST00000553837 CIDECQ96AQ7 238 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-207ENST00000553837 OTUB2Q96DC9 234 aa11.62□□□□□ -0.55
SHMT2-207ENST00000553837 DIRAS2Q96HU8 199 aa11.62□□□□□ -0.55
SHMT2-207ENST00000553837 TPD52L3Q96J77 140 aa11.62□□□□□ -0.55
SHMT2-207ENST00000553837 LRIG1Q96JA1 1093 aa11.62□□□□□ -0.55
SHMT2-207ENST00000553837 C7orf34Q96L11 122 aa11.62□□□□□ -0.55
SHMT2-207ENST00000553837 OPALINQ96PE5 141 aa11.62□□□□□ -0.55
SHMT2-207ENST00000553837 ZDHHC4Q9NPG8 344 aa11.62□□□□□ -0.55
SHMT2-207ENST00000553837 TAS2R16Q9NYV7 291 aa11.62□□□□□ -0.55
SHMT2-207ENST00000553837 BTNL2Q9UIR0 455 aa11.62□□□□□ -0.55
SHMT2-207ENST00000553837 PRKAB1Q9Y478 270 aa11.62□□□□□ -0.55
SHMT2-207ENST00000553837 AUP1Q9Y679 476 aa11.62□□□□□ -0.55
SHMT2-207ENST00000553837 CFAP20Q9Y6A4 193 aaKnown RBP11.62□□□□□ -0.55
SHMT2-207ENST00000553837 ZNF670-ZNF695F2Z2N8 137 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 TNFRSF11BO00300 401 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 MYL12BO14950 172 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 SLC22A5O76082 557 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 HMGN1P05114 100 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 MYL12AP19105 171 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 POU3F3P20264 500 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-207ENST00000553837 PTX3P26022 381 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-207ENST00000553837 KCNJ10P78508 379 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 HOXC5Q00444 222 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 RIPPLY1Q0D2K3 151 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 SLBPQ14493 270 aaKnown RBP eCLIP11.61□□□□□ -0.55
SHMT2-207ENST00000553837 RGNQ15493 299 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 MED27Q6P2C8 311 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 CAMKMTQ7Z624 323 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 TRAPPC5Q8IUR0 188 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 NPAS3Q8IXF0 933 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 ETFBKMTQ8IXQ9 262 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 C12orf76Q8N812 135 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-207ENST00000553837 NLGN4YQ8NFZ3 816 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-207ENST00000553837 OR4M2Q8NGB6 313 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 ZC3HAV1LQ96H79 300 aaKnown RBP11.61□□□□□ -0.55
SHMT2-207ENST00000553837 NECTIN4Q96NY8 510 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 DCLRE1CQ96SD1 692 aaKnown RBP11.61□□□□□ -0.55
SHMT2-207ENST00000553837 TMEM121BQ9BXQ6 578 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-207ENST00000553837 RACGAP1Q9H0H5 632 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 OR51B5Q9H339 312 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 ABCB9Q9NP78 766 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 TMEM184CQ9NVA4 438 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 SH3BP4Q9P0V3 963 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 REV3LO60673 3130 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 GNG14A0A1W2PPG7 69 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 MPZL2O60487 215 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 LGI1O95970 557 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 TGFB1P01137 390 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 C6P13671 934 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 PCSK2P16519 638 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 TNFRSF1BP20333 461 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 GPC1P35052 558 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 MAP2K3P46734 347 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 VASPP50552 380 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-207ENST00000553837 HBA1P69905 142 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 TAP2Q03519 686 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 MFSD13AQ14CX5 517 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.61□□□□□ -0.55
SHMT2-207ENST00000553837 HSDL2Q6YN16 418 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 ZNF600Q6ZNG1 722 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 COMMD6Q7Z4G1 85 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 FAM124AQ86V42 546 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 MMP21Q8N119 569 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 UBE2J2Q8N2K1 259 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 C2orf73Q8N5S3 287 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-207ENST00000553837 SLC5A8Q8N695 610 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 C19orf18Q8NEA5 215 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 DUSP18Q8NEJ0 188 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 VANGL1Q8TAA9 524 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-207ENST00000553837 FOPNLQ96NB1 174 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 IL17FQ96PD4 163 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 SPATA9Q9BWV2 254 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 SGPP1Q9BX95 441 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 HHATLQ9HCP6 504 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 CLN6Q9NWW5 311 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 TMCC3Q9ULS5 477 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 PLAGL1Q9UM63 463 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 STUB1Q9UNE7 303 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 SSR3Q9UNL2 185 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 PADI2Q9Y2J8 665 aa11.61□□□□□ -0.55
SHMT2-207ENST00000553837 MRPS23Q9Y3D9 190 aaKnown RBP11.61□□□□□ -0.55
SHMT2-207ENST00000553837 UNC80Q8N2C7 3258 aa11.6□□□□□ -0.55
SHMT2-207ENST00000553837 A0A1W2PQL4 384 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-207ENST00000553837 PIPSLA2A3N6 862 aa11.6□□□□□ -0.55
SHMT2-207ENST00000553837 MGAT4DA6NG13 374 aa11.6□□□□□ -0.55
SHMT2-207ENST00000553837 ADAMDEC1O15204 470 aa11.6□□□□□ -0.55
SHMT2-207ENST00000553837 RFPL3O75679 317 aa11.6□□□□□ -0.55
SHMT2-207ENST00000553837 SCO1O75880 301 aa11.6□□□□□ -0.55
SHMT2-207ENST00000553837 FHP07954 510 aa11.6□□□□□ -0.55
SHMT2-207ENST00000553837 ETFAP13804 333 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms