RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 KRT75O95678 551 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 NPPAP01160 153 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 IGHEP01854 428 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 UMODP07911 640 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 CT62P0C5K7 136 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 LIPCP11150 499 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 SSTR4P31391 388 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 SOX11P35716 441 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 CRATP43155 626 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 SLC7A2P52569 658 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 ZNF155Q12901 538 aaPredicted RBP9.12□□□□□ -0.95
CHD8-204ENST00000553622 SELPLGQ14242 412 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 ELAVL1Q15717 326 aaKnown RBP9.12□□□□□ -0.95
CHD8-204ENST00000553622 CEBPEQ15744 281 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 PRICKLE4Q2TBC4 344 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 TRMT12Q53H54 448 aaKnown RBP9.12□□□□□ -0.95
CHD8-204ENST00000553622 LACTB2Q53H82 288 aaPredicted RBP9.12□□□□□ -0.95
CHD8-204ENST00000553622 RABL3Q5HYI8 236 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.12□□□□□ -0.95
CHD8-204ENST00000553622 LRIF1Q5T3J3 769 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 NANOGP8Q6NSW7 305 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 BHLHB9Q6PI77 547 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 IGF2-ASQ6U949 168 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 BNC2Q6ZN30 1099 aaPredicted RBP9.12□□□□□ -0.95
CHD8-204ENST00000553622 MED25Q71SY5 747 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 C6orf120Q7Z4R8 191 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 CPEB2Q7Z5Q1 589 aaKnown RBP9.12□□□□□ -0.95
CHD8-204ENST00000553622 ARPINQ7Z6K5 226 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 IFNEQ86WN2 208 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 RNF130Q86XS8 419 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 MSRB3Q8IXL7 192 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 C7orf57Q8NEG2 295 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 NUP43Q8NFH3 380 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 OR56A1Q8NGH5 318 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 OR14A16Q8NHC5 309 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 GOT1L1Q8NHS2 421 aaPredicted RBP9.12□□□□□ -0.95
CHD8-204ENST00000553622 FBXO30Q8TB52 745 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 SFXN5Q8TD22 340 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 DAZLQ92904 295 aaKnown RBP9.12□□□□□ -0.95
CHD8-204ENST00000553622 SLC7A6OSQ96CW6 309 aaPredicted RBP9.12□□□□□ -0.95
CHD8-204ENST00000553622 FAM120BQ96EK7 910 aaKnown RBP9.12□□□□□ -0.95
CHD8-204ENST00000553622 OTUB1Q96FW1 271 aaPredicted RBP9.12□□□□□ -0.95
CHD8-204ENST00000553622 ZNF578Q96N58 590 aaPredicted RBP9.12□□□□□ -0.95
CHD8-204ENST00000553622 ANKRD27Q96NW4 1050 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 CDRT15Q96T59 188 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 SH3GL1Q99961 368 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 HOPXQ9BPY8 73 aaPredicted RBP9.12□□□□□ -0.95
CHD8-204ENST00000553622 ECSITQ9BQ95 431 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 CPPED1Q9BRF8 314 aaPredicted RBP9.12□□□□□ -0.95
CHD8-204ENST00000553622 MESP1Q9BRJ9 268 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 BTBD10Q9BSF8 475 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 THTPAQ9BU02 230 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 GPR87Q9BY21 358 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 NANOGQ9H9S0 305 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 CXorf21Q9HAI6 301 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 TPT1P8Q9HAU6 139 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 SPAG4Q9NPE6 437 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 TAS2R1Q9NYW7 299 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 MAT2BQ9NZL9 334 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 KCND3Q9UK17 655 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 FAF1Q9UNN5 650 aaPredicted RBP9.12□□□□□ -0.95
CHD8-204ENST00000553622 ERVK-11Q9UQG0 969 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 CLDN16Q9Y5I7 305 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 UPK1AO00322 258 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 COQ9O75208 318 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 DNAJC8O75937 253 aaPredicted RBP9.11□□□□□ -0.95
CHD8-204ENST00000553622 PDE5AO76074 875 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 SLITRK5O94991 958 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 C1QCP02747 245 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 ZCCHC18P0CG32 403 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 LIFP15018 202 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 PPIBP23284 216 aaKnown RBP9.11□□□□□ -0.95
CHD8-204ENST00000553622 F8A1P23610 371 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 SLC6A2P23975 617 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 PTPN6P29350 595 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 CPOXP36551 454 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 PGM1P36871 562 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 LASP1Q14847 261 aaKnown RBP9.11□□□□□ -0.95
CHD8-204ENST00000553622 CYP51A1Q16850 503 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 TBC1D25Q3MII6 688 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 RUNDC3AQ59EK9 446 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 TNFAIP8L2Q6P589 184 aaPredicted RBP9.11□□□□□ -0.95
CHD8-204ENST00000553622 PAPD4Q6PIY7 484 aaKnown RBP9.11□□□□□ -0.95
CHD8-204ENST00000553622 TMEM64Q6YI46 380 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 RNF111Q6ZNA4 994 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 WDR53Q7Z5U6 358 aaPredicted RBP9.11□□□□□ -0.95
CHD8-204ENST00000553622 YTHDF3Q7Z739 585 aaKnown RBP9.11□□□□□ -0.95
CHD8-204ENST00000553622 RAB43Q86YS6 212 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 RNF148Q8N7C7 305 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 SIMC1Q8NDZ2 872 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 OR52R1Q8NGF1 315 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 PSMA8Q8TAA3 256 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 SLC2A12Q8TD20 617 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 ZNF675Q8TD23 568 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 ZFP90Q8TF47 636 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 PTPMT1Q8WUK0 201 aaPredicted RBP9.11□□□□□ -0.95
CHD8-204ENST00000553622 TMEM125Q96AQ2 219 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 MOAP1Q96BY2 351 aa9.11□□□□□ -0.95
CHD8-204ENST00000553622 SENP5Q96HI0 755 aaPredicted RBP9.11□□□□□ -0.95
CHD8-204ENST00000553622 ART5Q96L15 291 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms