RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 S1PR1P21453 382 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 ETV4P43268 484 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 TMED10P49755 219 aaKnown RBP14.17□□□□□ -0.14
SHMT2-204ENST00000553324 DCAF7P61962 342 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 C2orf80Q0P641 193 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 ZNF750Q32MQ0 723 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 PAOXQ6QHF9 649 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 GK5Q6ZS86 529 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 IKBIPQ70UQ0 350 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 EXOC3L1Q86VI1 746 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 SIAH3Q8IW03 269 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 CCDC116Q8IYX3 515 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 MMP21Q8N119 569 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 PPP1R14CQ8TAE6 165 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 DOK4Q8TEW6 326 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 RELTQ969Z4 430 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 CTHRC1Q96CG8 243 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 SPACA9Q96E40 222 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-204ENST00000553324 CNRIP1Q96F85 164 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-204ENST00000553324 PGM2Q96G03 612 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 ZIM3Q96PE6 472 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 MECRQ9BV79 373 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 EBPLQ9BY08 206 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 LRTM1Q9HBL6 345 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 TNFRSF12AQ9NP84 129 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 MIEF1Q9NQG6 463 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 TAS2R7Q9NYW3 318 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 MAT2BQ9NZL9 334 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 BCAP29Q9UHQ4 241 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 ZNF639Q9UID6 485 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 ERRFI1Q9UJM3 462 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-204ENST00000553324 CCL27Q9Y4X3 112 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 DNAJC15Q9Y5T4 150 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 ACOT7O00154 380 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 TP53I11O14683 189 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 BIRC5O15392 142 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 ZNF354AO60765 605 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-204ENST00000553324 SLITRK5O94991 958 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 CLPSP04118 112 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 FBXO45P0C2W1 286 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 NR0B1P51843 470 aaKnown RBP14.16□□□□□ -0.14
SHMT2-204ENST00000553324 GPR85P60893 370 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 RPP38P78345 283 aaKnown RBP14.16□□□□□ -0.14
SHMT2-204ENST00000553324 MGAT2Q10469 447 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 KIAA0040Q15053 153 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 CEBPEQ15744 281 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 TNFAIP8L3Q5GJ75 292 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 FAM219BQ5XKK7 198 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 KANK2Q63ZY3 851 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 MTFR2Q6P444 385 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 FAM47EQ6ZV65 393 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 SLC22A16Q86VW1 577 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 ZNF441Q8N8Z8 693 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 OR2M7Q8NG81 312 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.16□□□□□ -0.14
SHMT2-204ENST00000553324 ZNF675Q8TD23 568 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 PAQR8Q8TEZ7 354 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 ADIPOR1Q96A54 375 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 EXOSC8Q96B26 276 aaKnown RBP14.16□□□□□ -0.14
SHMT2-204ENST00000553324 MAGED4Q96JG8 741 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 BBS4Q96RK4 519 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 MYNNQ9NPC7 610 aa14.16□□□□□ -0.14
SHMT2-204ENST00000553324 POLR3HQ9Y535 204 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-204ENST00000553324 ASH1LQ9NR48 2969 aaKnown RBP14.16□□□□□ -0.14
SHMT2-204ENST00000553324 FLNBO75369 2602 aaKnown RBP14.15□□□□□ -0.14
SHMT2-204ENST00000553324 TRGV8A0A0C4DH27 118 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 ACOX3O15254 700 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 SLC19A2O60779 497 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 ZWINTO95229 277 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 NADKO95544 446 aaPredicted RBP14.15□□□□□ -0.14
SHMT2-204ENST00000553324 LDLRP01130 860 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 CHRNGP07510 517 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 LINC00032P0C843 101 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 NAGAP17050 411 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 DDX5P17844 614 aaKnown RBP14.15□□□□□ -0.14
SHMT2-204ENST00000553324 SERPINB4P48594 390 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 PPIAP62937 165 aaKnown RBP14.15□□□□□ -0.14
SHMT2-204ENST00000553324 PSPHP78330 225 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 PLGLB1Q02325 96 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 NTRK2Q16620 822 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 TBCELQ5QJ74 424 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 SH2D4BQ5SQS7 431 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 FAM71E1Q6IPT2 247 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 FAM111BQ6SJ93 734 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 Q6ZSR9 355 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 SPPL2CQ8IUH8 684 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 DDIASQ8IXT1 998 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 KIRREL3Q8IZU9 778 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 ADCY4Q8NFM4 1077 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 OR6Y1Q8NGX8 325 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 HSPBAP1Q96EW2 488 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 SECISBP2Q96T21 854 aaKnown RBP14.15□□□□□ -0.14
SHMT2-204ENST00000553324 IL1RL2Q9HB29 575 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 SH2D2AQ9NP31 389 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 KCNK9Q9NPC2 374 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 FIS1Q9Y3D6 152 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 NPFFR2Q9Y5X5 522 aa14.15□□□□□ -0.14
SHMT2-204ENST00000553324 ANKRD33BA6NCL7 494 aa14.14□□□□□ -0.15
SHMT2-204ENST00000553324 TMEM114B3SHH9 223 aa14.14□□□□□ -0.15
SHMT2-204ENST00000553324 DRD5P21918 477 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms