RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 PIGGQ5H8A4 983 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 TCP11X2Q5H9J9 407 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 CAPN13Q6MZZ7 669 aaPredicted RBP4.68□□□□□ -1.66
CKAP4-203ENST00000553039 LYPD4Q6UWN0 246 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 PRSS41Q7RTY9 318 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 IRF2BP2Q7Z5L9 587 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 ASPGQ86U10 573 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 LUZP1Q86V48 1076 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 VSIG1Q86XK7 387 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 CILP2Q8IUL8 1156 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 TBC1D19Q8N5T2 526 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 ZNF527Q8NB42 609 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 MORN4Q8NDC4 146 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 NUP43Q8NFH3 380 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 PAQR8Q8TEZ7 354 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 NRG4Q8WWG1 115 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 SLC44A1Q8WWI5 657 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 FAM168AQ92567 244 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 UTP4Q969X6 686 aaKnown RBP4.68□□□□□ -1.66
CKAP4-203ENST00000553039 RGMAQ96B86 450 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 ERP27Q96DN0 273 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 STARD4Q96DR4 205 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 TM4SF19Q96DZ7 209 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 C11orf24Q96F05 449 aaPredicted RBP4.68□□□□□ -1.66
CKAP4-203ENST00000553039 PANX3Q96QZ0 392 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 FOXB1Q99853 325 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 TMEM204Q9BSN7 226 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 KLHL4Q9C0H6 718 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 PCBD2Q9H0N5 130 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 ZNF703Q9H7S9 590 aaPredicted RBP4.68□□□□□ -1.66
CKAP4-203ENST00000553039 LIN28AQ9H9Z2 209 aaKnown RBP4.68□□□□□ -1.66
CKAP4-203ENST00000553039 NLE1Q9NVX2 485 aaPredicted RBP4.68□□□□□ -1.66
CKAP4-203ENST00000553039 SAE1Q9UBE0 346 aaPredicted RBP4.68□□□□□ -1.66
CKAP4-203ENST00000553039 FETUBQ9UGM5 382 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 TAC3Q9UHF0 121 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 RSPH14Q9UHP6 348 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 DUSP13Q9UII6 198 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 ANAPC5Q9UJX4 755 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 MMACHCQ9Y4U1 282 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 ALPK2Q86TB3 2170 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 IGKV3D-11A0A0A0MRZ8 115 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 IGKV1-8A0A0C4DH67 115 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 SMTNL1A8MU46 457 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 CAPN14A8MX76 684 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 KDM4EB2RXH2 506 aaPredicted RBP4.67□□□□□ -1.66
CKAP4-203ENST00000553039 TP53I11O14683 189 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 GALR3O60755 368 aaPredicted RBP4.67□□□□□ -1.66
CKAP4-203ENST00000553039 CDH16O75309 829 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 SKAP2O75563 359 aaPredicted RBP4.67□□□□□ -1.66
CKAP4-203ENST00000553039 IFNA16P05015 189 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 SOD3P08294 240 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 DANCRP0C864 163 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 CCL3P10147 92 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 ALOX12P18054 663 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 MAOAP21397 527 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 NOS3P29474 1203 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 GJC1P36383 396 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 KCNC1P48547 511 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 CDK9P50750 372 aaKnown RBP4.67□□□□□ -1.66
CKAP4-203ENST00000553039 ZNF140P52738 457 aaPredicted RBP4.67□□□□□ -1.66
CKAP4-203ENST00000553039 PNLIPRP1P54315 467 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 HSD17B7P56937 341 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 MYL5Q02045 173 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 WASHC5Q12768 1159 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 FOXL1Q12952 345 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 TFDP2Q14188 446 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 CR1LQ2VPA4 569 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 AGAP6Q5VW22 663 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 STEAP3Q658P3 488 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 SLC9A4Q6AI14 798 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 ITPRIPL1Q6GPH6 555 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 ZNF474Q6S9Z5 364 aaPredicted RBP4.67□□□□□ -1.66
CKAP4-203ENST00000553039 UGT2A3Q6UWM9 527 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 IL17RELQ6ZVW7 336 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 ZNF550Q7Z398 422 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 P4HA3Q7Z4N8 544 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 ZAR1Q86SH2 424 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 LDB1Q86U70 411 aaPredicted RBP4.67□□□□□ -1.66
CKAP4-203ENST00000553039 GRAMD2AQ8IUY3 354 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 PLD3Q8IV08 490 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 VRK3Q8IV63 474 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 PIANPQ8IYJ0 282 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 CNEP1R1Q8N9A8 125 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 ANKRD9Q96BM1 317 aaPredicted RBP4.67□□□□□ -1.66
CKAP4-203ENST00000553039 RHBDF1Q96CC6 855 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 TRIM44Q96DX7 344 aaPredicted RBP4.67□□□□□ -1.66
CKAP4-203ENST00000553039 DTNBP1Q96EV8 351 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 OXNAD1Q96HP4 312 aaPredicted RBP4.67□□□□□ -1.66
CKAP4-203ENST00000553039 OLFM3Q96PB7 478 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 PIGQQ9BRB3 760 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 TACO1Q9BSH4 297 aaKnown RBP4.67□□□□□ -1.66
CKAP4-203ENST00000553039 DOHHQ9BU89 302 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 NTMT1Q9BV86 223 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 UGT2B28Q9BY64 529 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 ISCUQ9H1K1 167 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 FAM114A2Q9NRY5 505 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 MED29Q9NX70 200 aa4.67□□□□□ -1.66
CKAP4-203ENST00000553039 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.67□□□□□ -1.66
CKAP4-203ENST00000553039 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.67□□□□□ -1.664e-7■■□□□ 14
CKAP4-203ENST00000553039 ANAPC7Q9UJX3 599 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms