RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 SACM1LQ9NTJ5 587 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 SNX6Q9UNH7 406 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 TIMM22Q9Y584 194 aa11.99□□□□□ -0.49
NPAS3-209ENST00000551008 TACC2O95359 2948 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 A0A1B0GVC2 190 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 C1orf226A1L170 272 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 PLIN3O60664 434 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 CBX7O95931 251 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 ATP1B1P05026 303 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 TPOP07202 933 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 HSD3B1P14060 373 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 TAC1P20366 129 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 GPX3P22352 226 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 HSD3B2P26439 372 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 FEN1P39748 380 aaKnown RBP11.98□□□□□ -0.49
NPAS3-209ENST00000551008 KIR3DL1P43629 444 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 CASP6P55212 293 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 HMGCS1Q01581 520 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 PLGLB1Q02325 96 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 CSTF3Q12996 717 aaKnown RBP11.98□□□□□ -0.49
NPAS3-209ENST00000551008 LCP2Q13094 533 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 FNDC7Q5VTL7 733 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 BICRALQ6AI39 1079 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 XKRXQ6PP77 449 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 SCIMPQ6UWF3 145 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 FAM47EQ6ZV65 393 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 TRILQ7L0X0 811 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 SLC29A4Q7RTT9 530 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 PAGE2Q7Z2X7 111 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 LURAP1LQ8IV03 231 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 FBXW8Q8N3Y1 598 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 FAM109AQ8N4B1 249 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 NXF5Q9H1B4 397 aaKnown RBP11.98□□□□□ -0.49
NPAS3-209ENST00000551008 PNPLA3Q9NST1 481 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 AHSPQ9NZD4 102 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 SPRR3Q9UBC9 169 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 TNFRSF10DQ9UBN6 386 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 VPS29Q9UBQ0 182 aa11.98□□□□□ -0.49
NPAS3-209ENST00000551008 PRRG2O14669 202 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 HNRNPRO43390 633 aaKnown RBP11.97□□□□□ -0.49
NPAS3-209ENST00000551008 DYRK3O43781 588 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 GLRA3O75311 464 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 NME6O75414 186 aaPredicted RBP11.97□□□□□ -0.49
NPAS3-209ENST00000551008 ESRRBO95718 433 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 P04436 131 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 IL3P08700 152 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 ESRRAP11474 423 aaPredicted RBP11.97□□□□□ -0.49
NPAS3-209ENST00000551008 PORP16435 677 aaPredicted RBP11.97□□□□□ -0.49
NPAS3-209ENST00000551008 NT5EP21589 574 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 PKNOX1P55347 436 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 FBXW4P57775 412 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 MAP4K2Q12851 820 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 EXOSC7Q15024 291 aaKnown RBP11.97□□□□□ -0.49
NPAS3-209ENST00000551008 SLC22A10Q63ZE4 541 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 RTL6Q6ICC9 239 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 ARHGAP11AQ6P4F7 1023 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 SLC22A16Q86VW1 577 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 SLC22A9Q8IVM8 553 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 PRR22Q8IZ63 422 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 LRRC25Q8N386 305 aaPredicted RBP11.97□□□□□ -0.49
NPAS3-209ENST00000551008 FAM13CQ8NE31 585 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 ADCY4Q8NFM4 1077 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 METTL6Q8TCB7 284 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 TP53INP1Q96A56 240 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 DOCK7Q96N67 2140 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 OR10A5Q9H207 317 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 ANKRA2Q9H9E1 313 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.97□□□□□ -0.49
NPAS3-209ENST00000551008 MCM8Q9UJA3 840 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 EXO1Q9UQ84 846 aaKnown RBP11.97□□□□□ -0.49
NPAS3-209ENST00000551008 CCL27Q9Y4X3 112 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 FAM215AQ9Y5M1 114 aa11.97□□□□□ -0.49
NPAS3-209ENST00000551008 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.97□□□□□ -0.49
NPAS3-209ENST00000551008 OTOGQ6ZRI0 2925 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 C2orf92A0A1B0GVN3 265 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 ATP6AP2A0A1C7CYW4 349 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 SERTM1A2A2V5 107 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 SMIM23A6NLE4 172 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 NPIPA2E9PIF3 369 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 NPIPA3F8WFD2 350 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 ACOT7O00154 380 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 PCDH7O60245 1069 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 TRIM3O75382 744 aaPredicted RBP11.96□□□□□ -0.49
NPAS3-209ENST00000551008 ATP6AP2O75787 350 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 CLDN14O95500 239 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 KRT6AP02538 564 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 KRT6BP04259 564 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 ENO1P06733 434 aaKnown RBP11.96□□□□□ -0.49
NPAS3-209ENST00000551008 PCSK2P16519 638 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 HMOX2P30519 316 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 CRHR1P34998 444 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 KRT6CP48668 564 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 TRA2BP62995 288 aaKnown RBP11.96□□□□□ -0.49
NPAS3-209ENST00000551008 SLC18A2Q05940 514 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 NNATQ16517 81 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 TRMT12Q53H54 448 aaKnown RBP11.96□□□□□ -0.49
NPAS3-209ENST00000551008 GALNT18Q6P9A2 607 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 RGS9BPQ6ZS82 235 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 FRMD7Q6ZUT3 714 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 ZNF295-AS1Q8N0V1 137 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms