RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 ERVK-11Q9UQG0 969 aa12.74□□□□□ -0.37
TROAP-213ENST00000550709 COPG1Q9Y678 874 aaKnown RBP12.74□□□□□ -0.37
TROAP-213ENST00000550709 ZNF354AO60765 605 aaPredicted RBP12.73□□□□□ -0.37
TROAP-213ENST00000550709 SLC25A12O75746 678 aa12.73□□□□□ -0.37
TROAP-213ENST00000550709 OR6B1O95007 311 aa12.73□□□□□ -0.37
TROAP-213ENST00000550709 CD46P15529 392 aa12.73□□□□□ -0.37
TROAP-213ENST00000550709 EFNA1P20827 205 aaPredicted RBP12.73□□□□□ -0.37
TROAP-213ENST00000550709 S1PR1P21453 382 aa12.73□□□□□ -0.37
TROAP-213ENST00000550709 NTSP30990 170 aa12.73□□□□□ -0.37
TROAP-213ENST00000550709 MPIP34949 423 aa12.73□□□□□ -0.37
TROAP-213ENST00000550709 TRHRP34981 398 aaPredicted RBP12.73□□□□□ -0.37
TROAP-213ENST00000550709 SOX3P41225 446 aa12.73□□□□□ -0.37
TROAP-213ENST00000550709 ASMTP46597 345 aa12.73□□□□□ -0.37
TROAP-213ENST00000550709 PPP2R2AP63151 447 aa12.73□□□□□ -0.37
TROAP-213ENST00000550709 MAP4K2Q12851 820 aa12.73□□□□□ -0.37
TROAP-213ENST00000550709 MAPKAPK3Q16644 382 aa12.73□□□□□ -0.37
TROAP-213ENST00000550709 HLA-DQA1Q5Y7H0 255 aa12.73□□□□□ -0.37
TROAP-213ENST00000550709 KIRREL3Q8IZU9 778 aa12.73□□□□□ -0.37
TROAP-213ENST00000550709 CYP4Z2PQ8N1L4 340 aa12.73□□□□□ -0.37
TROAP-213ENST00000550709 ARMC10Q8N2F6 343 aa12.73□□□□□ -0.37
TROAP-213ENST00000550709 MDS2Q8NDY4 140 aa12.73□□□□□ -0.37
TROAP-213ENST00000550709 OR7G1Q8NGA0 311 aa12.73□□□□□ -0.37
TROAP-213ENST00000550709 OR52R1Q8NGF1 315 aa12.73□□□□□ -0.37
TROAP-213ENST00000550709 CIDECQ96AQ7 238 aaPredicted RBP12.73□□□□□ -0.37
TROAP-213ENST00000550709 MAGED4Q96JG8 741 aa12.73□□□□□ -0.37
TROAP-213ENST00000550709 WWTR1Q9GZV5 400 aa12.73□□□□□ -0.37
TROAP-213ENST00000550709 REEP4Q9H6H4 257 aa12.73□□□□□ -0.37
TROAP-213ENST00000550709 ASF1BQ9NVP2 202 aa12.73□□□□□ -0.37
TROAP-213ENST00000550709 EIF3LQ9Y262 564 aaKnown RBP12.73□□□□□ -0.37
TROAP-213ENST00000550709 NBASA2RRP1 2371 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 C2orf92A0A1B0GVN3 265 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 OR6C76A6NM76 312 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 A8MVJ9 347 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 MYO1GB0I1T2 1018 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 J3QKU1 62 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 NME6O75414 186 aaPredicted RBP12.72□□□□□ -0.37
TROAP-213ENST00000550709 NEURL1O76050 574 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 SP1P08047 785 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 SOX18P35713 384 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 NR0B1P51843 470 aaKnown RBP12.72□□□□□ -0.37
TROAP-213ENST00000550709 PMP22Q01453 160 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 OCRLQ01968 901 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 EMX2Q04743 252 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 DUSP8Q13202 625 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 PTGR1Q14914 329 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 EBPQ15125 230 aaKnown RBP12.72□□□□□ -0.37
TROAP-213ENST00000550709 ZNF385BQ569K4 471 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 ZNF628Q5EBL2 1059 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 PIGGQ5H8A4 983 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 SLC25A25Q6KCM7 469 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 TMEM64Q6YI46 380 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 ZNF227Q86WZ6 799 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 WDR75Q8IWA0 830 aaKnown RBP12.72□□□□□ -0.37
TROAP-213ENST00000550709 FAM9CQ8IZT9 166 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 KRTCAP2Q8N6L1 136 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 ZNF615Q8N8J6 731 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 OR7A2PQ8NGA2 310 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 C16orf52Q8NHV5 167 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 NUBPLQ8TB37 319 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 LRRC8CQ8TDW0 803 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 NUDT8Q8WV74 236 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 TMEM125Q96AQ2 219 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 GLIPR2Q9H4G4 154 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 WDR55Q9H6Y2 383 aaPredicted RBP12.72□□□□□ -0.37
TROAP-213ENST00000550709 INTS9Q9NV88 658 aaKnown RBP12.72□□□□□ -0.37
TROAP-213ENST00000550709 HPF1Q9NWY4 346 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 TAS2R7Q9NYW3 318 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 DTX4Q9Y2E6 619 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 NTNG1Q9Y2I2 539 aa12.72□□□□□ -0.37
TROAP-213ENST00000550709 GOLGA8QA0A0J9YX86 632 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 GOLGA8OA6NCC3 632 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 GOLGA8NF8WBI6 632 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 SDHDO14521 159 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 KLF11O14901 512 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 HDAC3O15379 428 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 PDPK1O15530 556 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 CBX7O95931 251 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 G6PDP11413 515 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 PRPS2P11908 318 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 HPCAL1P37235 193 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 DIO3P55073 304 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 FOXK1P85037 733 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 NNATQ16517 81 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 MPEG1Q2M385 716 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 FAM180AQ6UWF9 173 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 TMEM107Q6UX40 140 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 ZNF551Q7Z340 670 aaPredicted RBP12.71□□□□□ -0.37
TROAP-213ENST00000550709 GALNTL5Q7Z4T8 443 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 MDGA2Q7Z553 956 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 OR7G2Q8NG99 324 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 OR5M3Q8NGP4 307 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 SLC22A8Q8TCC7 542 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 GRHL3Q8TE85 626 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 CTHRC1Q96CG8 243 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 AMDHD1Q96NU7 426 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 TAAR6Q96RI8 345 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 MEAF6Q9HAF1 191 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 NOP53Q9NZM5 478 aaKnown RBP12.71□□□□□ -0.37
TROAP-213ENST00000550709 ZNF639Q9UID6 485 aa12.71□□□□□ -0.37
TROAP-213ENST00000550709 FASNP49327 2511 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms