RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 ATP6V1HQ9UI12 483 aa20.9■□□□□ 0.94
BRF1-216ENST00000550208 FCHO1O14526 889 aa20.89■□□□□ 0.93
BRF1-216ENST00000550208 ITGA10O75578 1167 aa20.89■□□□□ 0.93
BRF1-216ENST00000550208 OR2J2O76002 312 aa20.89■□□□□ 0.93
BRF1-216ENST00000550208 PCSK2P16519 638 aa20.89■□□□□ 0.93
BRF1-216ENST00000550208 EPHA3P29320 983 aa20.89■□□□□ 0.93
BRF1-216ENST00000550208 NCBP2P52298 156 aaKnown RBP eCLIP20.89■□□□□ 0.93
BRF1-216ENST00000550208 MRPS35P82673 323 aaKnown RBP20.89■□□□□ 0.93
BRF1-216ENST00000550208 DUSP8Q13202 625 aa20.89■□□□□ 0.93
BRF1-216ENST00000550208 PDE7AQ13946 482 aa20.89■□□□□ 0.93
BRF1-216ENST00000550208 TLR1Q15399 786 aa20.89■□□□□ 0.93
BRF1-216ENST00000550208 VWA5B2Q8N398 1253 aa20.89■□□□□ 0.93
BRF1-216ENST00000550208 KRTCAP2Q8N6L1 136 aa20.89■□□□□ 0.93
BRF1-216ENST00000550208 OR7G1Q8NGA0 311 aa20.89■□□□□ 0.93
BRF1-216ENST00000550208 OR7A2PQ8NGA2 310 aa20.89■□□□□ 0.93
BRF1-216ENST00000550208 CIDECQ96AQ7 238 aaPredicted RBP20.89■□□□□ 0.93
BRF1-216ENST00000550208 SIGLEC12Q96PQ1 595 aa20.89■□□□□ 0.93
BRF1-216ENST00000550208 GLIPR2Q9H4G4 154 aa20.89■□□□□ 0.93
BRF1-216ENST00000550208 ANKRA2Q9H9E1 313 aa20.89■□□□□ 0.93
BRF1-216ENST00000550208 SLAMF7Q9NQ25 335 aa20.89■□□□□ 0.93
BRF1-216ENST00000550208 BCAP29Q9UHQ4 241 aa20.89■□□□□ 0.93
BRF1-216ENST00000550208 YARS2Q9Y2Z4 477 aaKnown RBP20.89■□□□□ 0.93
BRF1-216ENST00000550208 USH1CQ9Y6N9 552 aa20.89■□□□□ 0.93
BRF1-216ENST00000550208 ZNF354AO60765 605 aaPredicted RBP20.88■□□□□ 0.93
BRF1-216ENST00000550208 CBX7O95931 251 aa20.88■□□□□ 0.93
BRF1-216ENST00000550208 TRHRP34981 398 aaPredicted RBP20.88■□□□□ 0.93
BRF1-216ENST00000550208 CLDN8P56748 225 aa20.88■□□□□ 0.93
BRF1-216ENST00000550208 OC90Q02509 493 aaPredicted RBP20.88■□□□□ 0.93
BRF1-216ENST00000550208 ZNF169Q14929 603 aaPredicted RBP20.88■□□□□ 0.93
BRF1-216ENST00000550208 PIGGQ5H8A4 983 aa20.88■□□□□ 0.93
BRF1-216ENST00000550208 SPINK14Q6IE38 97 aa20.88■□□□□ 0.93
BRF1-216ENST00000550208 FAM47EQ6ZV65 393 aa20.88■□□□□ 0.93
BRF1-216ENST00000550208 SLC29A4Q7RTT9 530 aa20.88■□□□□ 0.93
BRF1-216ENST00000550208 R3HCC1LQ7Z5L2 792 aaKnown RBP20.88■□□□□ 0.93
BRF1-216ENST00000550208 LRRC34Q8IZ02 419 aa20.88■□□□□ 0.93
BRF1-216ENST00000550208 FAM9CQ8IZT9 166 aa20.88■□□□□ 0.93
BRF1-216ENST00000550208 NUBPLQ8TB37 319 aa20.88■□□□□ 0.93
BRF1-216ENST00000550208 ZNF675Q8TD23 568 aa20.88■□□□□ 0.93
BRF1-216ENST00000550208 MTERF3Q96E29 417 aa20.88■□□□□ 0.93
BRF1-216ENST00000550208 ZNF764Q96H86 408 aaPredicted RBP20.88■□□□□ 0.93
BRF1-216ENST00000550208 AMDHD1Q96NU7 426 aa20.88■□□□□ 0.93
BRF1-216ENST00000550208 SPTA1P02549 2419 aa20.87■□□□□ 0.93
BRF1-216ENST00000550208 KALRNO60229 2985 aa20.87■□□□□ 0.93
BRF1-216ENST00000550208 OR6C76A6NM76 312 aa20.87■□□□□ 0.93
BRF1-216ENST00000550208 SCAMP2O15127 329 aaKnown RBP20.87■□□□□ 0.93
BRF1-216ENST00000550208 SORBS2O94875 1100 aaKnown RBP20.87■□□□□ 0.93
BRF1-216ENST00000550208 LAMP1P11279 417 aa20.87■□□□□ 0.93
BRF1-216ENST00000550208 NTSP30990 170 aa20.87■□□□□ 0.93
BRF1-216ENST00000550208 HPCAL1P37235 193 aa20.87■□□□□ 0.93
BRF1-216ENST00000550208 CASRP41180 1078 aa20.87■□□□□ 0.93
BRF1-216ENST00000550208 HLCSP50747 726 aa20.87■□□□□ 0.93
BRF1-216ENST00000550208 EBPQ15125 230 aaKnown RBP20.87■□□□□ 0.93
BRF1-216ENST00000550208 OR1C1Q15619 314 aa20.87■□□□□ 0.93
BRF1-216ENST00000550208 NXNQ6DKJ4 435 aa20.87■□□□□ 0.93
BRF1-216ENST00000550208 OGFOD2Q6N063 350 aa20.87■□□□□ 0.93
BRF1-216ENST00000550208 ZNF551Q7Z340 670 aaPredicted RBP20.87■□□□□ 0.93
BRF1-216ENST00000550208 ZNF227Q86WZ6 799 aa20.87■□□□□ 0.93
BRF1-216ENST00000550208 RIMKLAQ8IXN7 391 aa20.87■□□□□ 0.93
BRF1-216ENST00000550208 TMEM156Q8N614 296 aa20.87■□□□□ 0.93
BRF1-216ENST00000550208 ARFGAP2Q8N6H7 521 aa20.87■□□□□ 0.93
BRF1-216ENST00000550208 OR52R1Q8NGF1 315 aa20.87■□□□□ 0.93
BRF1-216ENST00000550208 MAELQ96JY0 434 aaKnown RBP20.87■□□□□ 0.93
BRF1-216ENST00000550208 GAL3ST4Q96RP7 486 aa20.87■□□□□ 0.93
BRF1-216ENST00000550208 RASL10BQ96S79 203 aa20.87■□□□□ 0.93
BRF1-216ENST00000550208 WWTR1Q9GZV5 400 aa20.87■□□□□ 0.93
BRF1-216ENST00000550208 LRFN1Q9P244 771 aa20.87■□□□□ 0.93
BRF1-216ENST00000550208 TRAV17A0A0B4J275 112 aa20.86■□□□□ 0.93
BRF1-216ENST00000550208 C2orf92A0A1B0GVN3 265 aa20.86■□□□□ 0.93
BRF1-216ENST00000550208 PDPK1O15530 556 aa20.86■□□□□ 0.93
BRF1-216ENST00000550208 ALDOCP09972 364 aaKnown RBP20.86■□□□□ 0.93
BRF1-216ENST00000550208 EFNA1P20827 205 aaPredicted RBP20.86■□□□□ 0.93
BRF1-216ENST00000550208 PRPS1L1P21108 318 aa20.86■□□□□ 0.93
BRF1-216ENST00000550208 CYB561P49447 251 aa20.86■□□□□ 0.93
BRF1-216ENST00000550208 SSR4P51571 173 aa20.86■□□□□ 0.93
BRF1-216ENST00000550208 CPTPQ5TA50 214 aa20.86■□□□□ 0.93
BRF1-216ENST00000550208 EPGNQ6UW88 154 aa20.86■□□□□ 0.93
BRF1-216ENST00000550208 RGS9BPQ6ZS82 235 aa20.86■□□□□ 0.93
BRF1-216ENST00000550208 PRICKLE2Q7Z3G6 844 aa20.86■□□□□ 0.93
BRF1-216ENST00000550208 SPATA19Q7Z5L4 167 aa20.86■□□□□ 0.93
BRF1-216ENST00000550208 MDS2Q8NDY4 140 aa20.86■□□□□ 0.93
BRF1-216ENST00000550208 OR7G2Q8NG99 324 aa20.86■□□□□ 0.93
BRF1-216ENST00000550208 C16orf52Q8NHV5 167 aa20.86■□□□□ 0.93
BRF1-216ENST00000550208 COQ8BQ96D53 544 aa20.86■□□□□ 0.93
BRF1-216ENST00000550208 OR52B2Q96RD2 323 aa20.86■□□□□ 0.93
BRF1-216ENST00000550208 TRIM45Q9H8W5 580 aaPredicted RBP20.86■□□□□ 0.93
BRF1-216ENST00000550208 BSNQ9UPA5 3926 aa20.85■□□□□ 0.93
BRF1-216ENST00000550208 TTLL8A6PVC2 850 aa20.85■□□□□ 0.93
BRF1-216ENST00000550208 CDK2AP1O14519 115 aa20.85■□□□□ 0.93
BRF1-216ENST00000550208 PRAMEF2O60811 474 aa20.85■□□□□ 0.93
BRF1-216ENST00000550208 DIAPH2O60879 1101 aa20.85■□□□□ 0.93
BRF1-216ENST00000550208 NME6O75414 186 aaPredicted RBP20.85■□□□□ 0.93
BRF1-216ENST00000550208 NEURL1O76050 574 aa20.85■□□□□ 0.93
BRF1-216ENST00000550208 OR6B1O95007 311 aa20.85■□□□□ 0.93
BRF1-216ENST00000550208 RPL3P39023 403 aaKnown RBP20.85■□□□□ 0.93
BRF1-216ENST00000550208 EMDP50402 254 aa20.85■□□□□ 0.93
BRF1-216ENST00000550208 MLLT10P55197 1068 aa20.85■□□□□ 0.93
BRF1-216ENST00000550208 FHL5Q5TD97 284 aa20.85■□□□□ 0.93
BRF1-216ENST00000550208 ZNF441Q8N8Z8 693 aa20.85■□□□□ 0.93
BRF1-216ENST00000550208 ACTRT2Q8TDY3 377 aa20.85■□□□□ 0.93
BRF1-216ENST00000550208 ASB15Q8WXK1 588 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms