RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 MAP1BP46821 2468 aaKnown RBP19.63■□□□□ 0.73
CACNB3-210ENST00000548874 A0A087WV62 115 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 FCHO1O14526 889 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 SLC22A2O15244 555 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 CBX7O95931 251 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 SSTR4P31391 388 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 MC3RP41968 323 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 CDK9P50750 372 aaKnown RBP19.62■□□□□ 0.73
CACNB3-210ENST00000548874 SLC37A1P57057 533 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 KCNK10P57789 538 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 AP2B1P63010 937 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 KLF10Q13118 480 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 DUSP8Q13202 625 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 TIGD2Q4W5G0 525 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 GKAP1Q5VSY0 366 aaPredicted RBP19.62■□□□□ 0.73
CACNB3-210ENST00000548874 CLECL1Q8IZS7 167 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 ZNF615Q8N8J6 731 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 ANKS4BQ8N8V4 417 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 VPS37AQ8NEZ2 397 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 OR7G2Q8NG99 324 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 OR7G1Q8NGA0 311 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 ELP4Q96EB1 424 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 CRELD1Q96HD1 420 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 CCDC115Q96NT0 180 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 TRIM4Q9C037 500 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 MYLK2Q9H1R3 596 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 NEUROD4Q9HD90 331 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 COPS7AQ9UBW8 275 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 BTNL2Q9UIR0 455 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 ERVK-11Q9UQG0 969 aa19.62■□□□□ 0.73
CACNB3-210ENST00000548874 DYTNA2CJ06 578 aa19.61■□□□□ 0.73
CACNB3-210ENST00000548874 CFLARO15519 480 aa19.61■□□□□ 0.73
CACNB3-210ENST00000548874 ITGAMP11215 1152 aa19.61■□□□□ 0.73
CACNB3-210ENST00000548874 CAPN3P20807 821 aa19.61■□□□□ 0.73
CACNB3-210ENST00000548874 CLCN2P51788 898 aa19.61■□□□□ 0.73
CACNB3-210ENST00000548874 HBA1P69905 142 aa19.61■□□□□ 0.73
CACNB3-210ENST00000548874 LRRC74AQ0VAA2 488 aa19.61■□□□□ 0.73
CACNB3-210ENST00000548874 ST3GAL2Q16842 350 aa19.61■□□□□ 0.73
CACNB3-210ENST00000548874 JMJD6Q6NYC1 403 aaPredicted RBP19.61■□□□□ 0.73
CACNB3-210ENST00000548874 TMEM107Q6UX40 140 aa19.61■□□□□ 0.73
CACNB3-210ENST00000548874 MTDHQ86UE4 582 aaKnown RBP19.61■□□□□ 0.73
CACNB3-210ENST00000548874 ANKRD46Q86W74 232 aa19.61■□□□□ 0.73
CACNB3-210ENST00000548874 OR2L13Q8N349 312 aa19.61■□□□□ 0.73
CACNB3-210ENST00000548874 GALNT16Q8N428 558 aa19.61■□□□□ 0.73
CACNB3-210ENST00000548874 KIF2BQ8N4N8 673 aa19.61■□□□□ 0.73
CACNB3-210ENST00000548874 SIMC1Q8NDZ2 872 aa19.61■□□□□ 0.73
CACNB3-210ENST00000548874 TSPEARQ8WU66 669 aa19.61■□□□□ 0.73
CACNB3-210ENST00000548874 APOBEC4Q8WW27 367 aaKnown RBP19.61■□□□□ 0.73
CACNB3-210ENST00000548874 PSMF1Q92530 271 aa19.61■□□□□ 0.73
CACNB3-210ENST00000548874 VPS33AQ96AX1 596 aa19.61■□□□□ 0.73
CACNB3-210ENST00000548874 SPDL1Q96EA4 605 aa19.61■□□□□ 0.73
CACNB3-210ENST00000548874 SERHLQ9NQF3 203 aa19.61■□□□□ 0.73
CACNB3-210ENST00000548874 NTMQ9P121 344 aa19.61■□□□□ 0.73
CACNB3-210ENST00000548874 PTGFRNQ9P2B2 879 aa19.61■□□□□ 0.73
CACNB3-210ENST00000548874 C19orf53Q9UNZ5 99 aaPredicted RBP19.61■□□□□ 0.73
CACNB3-210ENST00000548874 MED13Q9UHV7 2174 aa19.6■□□□□ 0.73
CACNB3-210ENST00000548874 TRBV11-1A0A0K0K1C0 115 aa19.6■□□□□ 0.73
CACNB3-210ENST00000548874 ASPDHA6ND91 283 aa19.6■□□□□ 0.73
CACNB3-210ENST00000548874 NR5A2O00482 541 aa19.6■□□□□ 0.73
CACNB3-210ENST00000548874 CEACAM4O75871 244 aa19.6■□□□□ 0.73
CACNB3-210ENST00000548874 PSMG1O95456 288 aa19.6■□□□□ 0.73
CACNB3-210ENST00000548874 ITGB2P05107 769 aa19.6■□□□□ 0.73
CACNB3-210ENST00000548874 GPC1P35052 558 aa19.6■□□□□ 0.73
CACNB3-210ENST00000548874 EXOSC7Q15024 291 aaKnown RBP19.6■□□□□ 0.73
CACNB3-210ENST00000548874 H3F3CQ6NXT2 135 aa19.6■□□□□ 0.73
CACNB3-210ENST00000548874 BORAQ6PGQ7 559 aa19.6■□□□□ 0.73
CACNB3-210ENST00000548874 RNF111Q6ZNA4 994 aa19.6■□□□□ 0.73
CACNB3-210ENST00000548874 GK5Q6ZS86 529 aa19.6■□□□□ 0.73
CACNB3-210ENST00000548874 OR8K3Q8NH51 312 aa19.6■□□□□ 0.73
CACNB3-210ENST00000548874 GOT1L1Q8NHS2 421 aaPredicted RBP19.6■□□□□ 0.73
CACNB3-210ENST00000548874 THOC3Q96J01 351 aaKnown RBP19.6■□□□□ 0.73
CACNB3-210ENST00000548874 LHPPQ9H008 270 aa19.6■□□□□ 0.73
CACNB3-210ENST00000548874 OR10A5Q9H207 317 aa19.6■□□□□ 0.73
CACNB3-210ENST00000548874 CXorf36Q9H7Y0 433 aa19.6■□□□□ 0.73
CACNB3-210ENST00000548874 ANKRA2Q9H9E1 313 aa19.6■□□□□ 0.73
CACNB3-210ENST00000548874 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.6■□□□□ 0.73
CACNB3-210ENST00000548874 TAS2R9Q9NYW1 312 aa19.6■□□□□ 0.73
CACNB3-210ENST00000548874 CAPN7Q9Y6W3 813 aa19.6■□□□□ 0.73
CACNB3-210ENST00000548874 CCDC154A6NI56 674 aa19.59■□□□□ 0.73
CACNB3-210ENST00000548874 OR6C76A6NM76 312 aa19.59■□□□□ 0.73
CACNB3-210ENST00000548874 UPK1AO00322 258 aa19.59■□□□□ 0.73
CACNB3-210ENST00000548874 BCAS2O75934 225 aaPredicted RBP19.59■□□□□ 0.73
CACNB3-210ENST00000548874 DNAJB5O75953 348 aa19.59■□□□□ 0.73
CACNB3-210ENST00000548874 ITGA3P26006 1051 aa19.59■□□□□ 0.73
CACNB3-210ENST00000548874 TLR1Q15399 786 aa19.59■□□□□ 0.73
CACNB3-210ENST00000548874 TBR1Q16650 682 aa19.59■□□□□ 0.73
CACNB3-210ENST00000548874 VPS26BQ4G0F5 336 aa19.59■□□□□ 0.73
CACNB3-210ENST00000548874 TMEM64Q6YI46 380 aa19.59■□□□□ 0.73
CACNB3-210ENST00000548874 HSDL2Q6YN16 418 aa19.59■□□□□ 0.73
CACNB3-210ENST00000548874 C9orf40Q8IXQ3 194 aa19.59■□□□□ 0.73
CACNB3-210ENST00000548874 ARMC10Q8N2F6 343 aa19.59■□□□□ 0.73
CACNB3-210ENST00000548874 OR52R1Q8NGF1 315 aa19.59■□□□□ 0.73
CACNB3-210ENST00000548874 BCAS4Q8TDM0 211 aa19.59■□□□□ 0.73
CACNB3-210ENST00000548874 CCDC106Q9BWC9 280 aa19.59■□□□□ 0.73
CACNB3-210ENST00000548874 ARMCX1Q9P291 453 aa19.59■□□□□ 0.73
CACNB3-210ENST00000548874 A0A1W2PP18 115 aa19.58■□□□□ 0.72
CACNB3-210ENST00000548874 NDUFAB1O14561 156 aa19.58■□□□□ 0.72
CACNB3-210ENST00000548874 PRKNO60260 465 aaPredicted RBP19.58■□□□□ 0.72
CACNB3-210ENST00000548874 PRAMEF2O60811 474 aa19.58■□□□□ 0.72
CACNB3-210ENST00000548874 ZFAND5O76080 213 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms