RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 C2orf80Q0P641 193 aa18.76■□□□□ 0.59
CTDSP2-204ENST00000548823 SF1Q15637 639 aaKnown RBP18.76■□□□□ 0.59
CTDSP2-204ENST00000548823 CYP51A1Q16850 503 aa18.76■□□□□ 0.59
CTDSP2-204ENST00000548823 GTDC1Q4AE62 458 aa18.76■□□□□ 0.59
CTDSP2-204ENST00000548823 CRB2Q5IJ48 1285 aa18.76■□□□□ 0.59
CTDSP2-204ENST00000548823 TBCELQ5QJ74 424 aa18.76■□□□□ 0.59
CTDSP2-204ENST00000548823 ZNF425Q6IV72 752 aa18.76■□□□□ 0.59
CTDSP2-204ENST00000548823 ANKFN1Q8N957 763 aa18.76■□□□□ 0.59
CTDSP2-204ENST00000548823 CREB3L4Q8TEY5 395 aa18.76■□□□□ 0.59
CTDSP2-204ENST00000548823 POM121Q96HA1 1249 aa18.76■□□□□ 0.59
CTDSP2-204ENST00000548823 SLC6A20Q9NP91 592 aa18.76■□□□□ 0.59
CTDSP2-204ENST00000548823 AP1M2Q9Y6Q5 423 aa18.76■□□□□ 0.59
CTDSP2-204ENST00000548823 MTORP42345 2549 aa18.76■□□□□ 0.59
CTDSP2-204ENST00000548823 CLIC1O00299 241 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 GSTA4O15217 222 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 NDUFS4O43181 175 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 SH3BGRLO75368 114 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 KLK1P06870 262 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 ABCB1P08183 1280 aaPredicted RBP18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 KIR2DS3Q14952 304 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 GRAMD1BQ3KR37 738 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 ADPRMQ3LIE5 342 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 SFT2D3Q587I9 215 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 ERICH5Q6P6B1 374 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 DNAJC14Q6Y2X3 702 aaPredicted RBP18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 FKBP9P1Q75LS8 142 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 GDF7Q7Z4P5 450 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 ANKRD46Q86W74 232 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 CDC26Q8NHZ8 85 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 LRTOMTQ8WZ04 291 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 PPCDCQ96CD2 204 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 ZDHHC12Q96GR4 267 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 VCXQ9H320 206 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 C8orf4Q9NR00 106 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 POT1Q9NUX5 634 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 OLAHQ9NV23 265 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 ZNF282Q9UDV7 671 aaPredicted RBP18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 ITGB1BP2Q9UKP3 347 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 USP22Q9UPT9 525 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 CCDC168Q8NDH2 2452 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 PCNX1Q96RV3 2341 aa18.75■□□□□ 0.59
CTDSP2-204ENST00000548823 FEZF1A0PJY2 475 aa18.74■□□□□ 0.59
CTDSP2-204ENST00000548823 LCMT2O60294 686 aaKnown RBP18.74■□□□□ 0.59
CTDSP2-204ENST00000548823 ZG16O60844 167 aa18.74■□□□□ 0.59
CTDSP2-204ENST00000548823 VIPP01282 170 aa18.74■□□□□ 0.59
CTDSP2-204ENST00000548823 NCK1P16333 377 aa18.74■□□□□ 0.59
CTDSP2-204ENST00000548823 FASP25445 335 aa18.74■□□□□ 0.59
CTDSP2-204ENST00000548823 HSPA13P48723 471 aa18.74■□□□□ 0.59
CTDSP2-204ENST00000548823 RRADP55042 308 aa18.74■□□□□ 0.59
CTDSP2-204ENST00000548823 TAS2R50P59544 299 aa18.74■□□□□ 0.59
CTDSP2-204ENST00000548823 CCNYL2Q5T2Q4 361 aa18.74■□□□□ 0.59
CTDSP2-204ENST00000548823 ZNF517Q6ZMY9 492 aaPredicted RBP18.74■□□□□ 0.59
CTDSP2-204ENST00000548823 NUDT13Q86X67 352 aa18.74■□□□□ 0.59
CTDSP2-204ENST00000548823 ADGRF3Q8IZF5 1079 aa18.74■□□□□ 0.59
CTDSP2-204ENST00000548823 ICA1LQ8NDH6 482 aa18.74■□□□□ 0.59
CTDSP2-204ENST00000548823 F2RL3Q96RI0 385 aa18.74■□□□□ 0.59
CTDSP2-204ENST00000548823 SRMSQ9H3Y6 488 aa18.74■□□□□ 0.59
CTDSP2-204ENST00000548823 DDX31Q9H8H2 851 aaKnown RBP18.74■□□□□ 0.59
CTDSP2-204ENST00000548823 AGPAT4Q9NRZ5 378 aa18.74■□□□□ 0.59
CTDSP2-204ENST00000548823 SH3BP4Q9P0V3 963 aa18.74■□□□□ 0.59
CTDSP2-204ENST00000548823 EPHA6Q9UF33 1036 aa18.74■□□□□ 0.59
CTDSP2-204ENST00000548823 C1orf226A1L170 272 aa18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 GSNP06396 782 aa18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 FOLR1P15328 257 aa18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 PTGER4P35408 488 aa18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 TSFMP43897 325 aaKnown RBP18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 CAPZBP47756 277 aa18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 RELAQ04206 551 aa18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 KLC1Q07866 573 aa18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 ZNF385BQ569K4 471 aa18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 HMBOX1Q6NT76 420 aa18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 IRGCQ6NXR0 463 aa18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 ZNF621Q6ZSS3 439 aa18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 FAM92BQ6ZTR7 304 aa18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 RBM12BQ8IXT5 1001 aaKnown RBP18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 MFSD9Q8NBP5 474 aa18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 MR1Q95460 341 aa18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 SLC41A2Q96JW4 573 aa18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 DPH7Q9BTV6 452 aa18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 UGT2B28Q9BY64 529 aa18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 YY1AP1Q9H869 796 aa18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 SPHK1Q9NYA1 384 aa18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 SEMA5BQ9P283 1151 aa18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 SVILO95425 2214 aa18.73■□□□□ 0.59
CTDSP2-204ENST00000548823 LRIT2A6NDA9 550 aa18.72■□□□□ 0.59
CTDSP2-204ENST00000548823 SAP18O00422 153 aaKnown RBP18.72■□□□□ 0.59
CTDSP2-204ENST00000548823 CXCR6O00574 342 aa18.72■□□□□ 0.59
CTDSP2-204ENST00000548823 CPNE3O75131 537 aaKnown RBP18.72■□□□□ 0.59
CTDSP2-204ENST00000548823 TIPRLO75663 272 aa18.72■□□□□ 0.59
CTDSP2-204ENST00000548823 CPSF4O95639 269 aaKnown RBP18.72■□□□□ 0.59
CTDSP2-204ENST00000548823 B3GALT4O96024 378 aa18.72■□□□□ 0.59
CTDSP2-204ENST00000548823 RPSAP08865 295 aaKnown RBP18.72■□□□□ 0.59
CTDSP2-204ENST00000548823 UQCRBP14927 111 aa18.72■□□□□ 0.59
CTDSP2-204ENST00000548823 MAPK12P53778 367 aa18.72■□□□□ 0.59
CTDSP2-204ENST00000548823 ACY1Q03154 408 aa18.72■□□□□ 0.59
CTDSP2-204ENST00000548823 LRRC36Q1X8D7 754 aa18.72■□□□□ 0.59
CTDSP2-204ENST00000548823 IGFL3Q6UXB1 125 aa18.72■□□□□ 0.59
CTDSP2-204ENST00000548823 ADCK2Q7Z695 626 aa18.72■□□□□ 0.59
CTDSP2-204ENST00000548823 PAQR7Q86WK9 346 aa18.72■□□□□ 0.59
CTDSP2-204ENST00000548823 TRIM48Q8IWZ4 208 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms