RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 CNRIP1Q96F85 164 aaPredicted RBP14.68□□□□□ -0.06
DDX54-204ENST00000546898 MAGED4Q96JG8 741 aa14.68□□□□□ -0.06
DDX54-204ENST00000546898 ZNF681Q96N22 645 aa14.68□□□□□ -0.06
DDX54-204ENST00000546898 FAM173AQ9BQD7 235 aa14.68□□□□□ -0.06
DDX54-204ENST00000546898 EBPLQ9BY08 206 aa14.68□□□□□ -0.06
DDX54-204ENST00000546898 BRINP2Q9C0B6 783 aa14.68□□□□□ -0.06
DDX54-204ENST00000546898 TSPAN10Q9H1Z9 355 aaPredicted RBP14.68□□□□□ -0.06
DDX54-204ENST00000546898 EML4Q9HC35 981 aaKnown RBP14.68□□□□□ -0.06
DDX54-204ENST00000546898 DEPPQ9NTK1 212 aa14.68□□□□□ -0.06
DDX54-204ENST00000546898 GIMAP4Q9NUV9 329 aa14.68□□□□□ -0.06
DDX54-204ENST00000546898 ZNF639Q9UID6 485 aa14.68□□□□□ -0.06
DDX54-204ENST00000546898 ENTPD4Q9Y227 616 aa14.68□□□□□ -0.06
DDX54-204ENST00000546898 CAPN14A8MX76 684 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 ACOT7O00154 380 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 SLC28A1O00337 649 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 RGS14O43566 566 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 SLC19A2O60779 497 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 FBXO45P0C2W1 286 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 RNF224P0DH78 156 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 GP1BBP13224 206 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 CNR1P21554 472 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 CA7P43166 264 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 TMED10P49755 219 aaKnown RBP14.67□□□□□ -0.06
DDX54-204ENST00000546898 CASP6P55212 293 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 MGAT2Q10469 447 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 CEBPEQ15744 281 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 C1QL3Q5VWW1 255 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 KANK2Q63ZY3 851 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 RGS9BPQ6ZS82 235 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 IKBIPQ70UQ0 350 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 ZNF675Q8TD23 568 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 PAQR8Q8TEZ7 354 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 CTHRC1Q96CG8 243 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 ERP27Q96DN0 273 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 MECRQ9BV79 373 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 SH2D2AQ9NP31 389 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 SSU72Q9NP77 194 aaKnown RBP14.67□□□□□ -0.06
DDX54-204ENST00000546898 MYNNQ9NPC7 610 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 PFDN4Q9NQP4 134 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 ZNF835Q9Y2P0 537 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 CCL27Q9Y4X3 112 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 DNAJC13O75165 2243 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 ZNF407Q9C0G0 2248 aa14.67□□□□□ -0.06
DDX54-204ENST00000546898 TRGV8A0A0C4DH27 118 aa14.66□□□□□ -0.06
DDX54-204ENST00000546898 BCAS2O75934 225 aaPredicted RBP14.66□□□□□ -0.06
DDX54-204ENST00000546898 FGF4P08620 206 aa14.66□□□□□ -0.06
DDX54-204ENST00000546898 CCL3P10147 92 aa14.66□□□□□ -0.06
DDX54-204ENST00000546898 CREB1P16220 341 aa14.66□□□□□ -0.06
DDX54-204ENST00000546898 DDCP20711 480 aa14.66□□□□□ -0.06
DDX54-204ENST00000546898 S1PR1P21453 382 aa14.66□□□□□ -0.06
DDX54-204ENST00000546898 GPX3P22352 226 aa14.66□□□□□ -0.06
DDX54-204ENST00000546898 ETV4P43268 484 aa14.66□□□□□ -0.06
DDX54-204ENST00000546898 NRG3P56975 720 aa14.66□□□□□ -0.06
DDX54-204ENST00000546898 PLGLB1Q02325 96 aa14.66□□□□□ -0.06
DDX54-204ENST00000546898 DUSP2Q05923 314 aa14.66□□□□□ -0.06
DDX54-204ENST00000546898 NTRK2Q16620 822 aa14.66□□□□□ -0.06
DDX54-204ENST00000546898 SLC22A10Q63ZE4 541 aa14.66□□□□□ -0.06
DDX54-204ENST00000546898 MTFR2Q6P444 385 aa14.66□□□□□ -0.06
DDX54-204ENST00000546898 Q6ZPB1 254 aaPredicted RBP14.66□□□□□ -0.06
DDX54-204ENST00000546898 FAM47EQ6ZV65 393 aa14.66□□□□□ -0.06
DDX54-204ENST00000546898 FJX1Q86VR8 437 aa14.66□□□□□ -0.06
DDX54-204ENST00000546898 FBXW8Q8N3Y1 598 aa14.66□□□□□ -0.06
DDX54-204ENST00000546898 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.66□□□□□ -0.06
DDX54-204ENST00000546898 ADIPOR1Q96A54 375 aa14.66□□□□□ -0.06
DDX54-204ENST00000546898 EXOSC8Q96B26 276 aaKnown RBP14.66□□□□□ -0.06
DDX54-204ENST00000546898 MIEF1Q9NQG6 463 aa14.66□□□□□ -0.06
DDX54-204ENST00000546898 SLC35C2Q9NQQ7 365 aa14.66□□□□□ -0.06
DDX54-204ENST00000546898 CNIH4Q9P003 139 aa14.66□□□□□ -0.06
DDX54-204ENST00000546898 SUCOQ9UBS9 1254 aaKnown RBP14.66□□□□□ -0.06
DDX54-204ENST00000546898 POLR3HQ9Y535 204 aaPredicted RBP14.66□□□□□ -0.06
DDX54-204ENST00000546898 UTP20O75691 2785 aaKnown RBP14.66□□□□□ -0.06
DDX54-204ENST00000546898 NINQ8N4C6 2090 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 TP53I11O14683 189 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 CTIFO43310 598 aaKnown RBP14.65□□□□□ -0.06
DDX54-204ENST00000546898 HS6ST1O60243 411 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 SEC22BO75396 215 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 WISP2O76076 250 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 SLITRK5O94991 958 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 CBX7O95931 251 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 CHRNGP07510 517 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 BPGMP07738 259 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 RFC3P40938 356 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 NR0B1P51843 470 aaKnown RBP14.65□□□□□ -0.06
DDX54-204ENST00000546898 C2orf80Q0P641 193 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 RPS6KA2Q15349 733 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 ZNF628Q5EBL2 1059 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 CMPK2Q5EBM0 449 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 ARL13AQ5H913 290 aaPredicted RBP14.65□□□□□ -0.06
DDX54-204ENST00000546898 CEP85LQ5SZL2 805 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 FAM71E1Q6IPT2 247 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 NOXRED1Q6NXP6 359 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 FAM111BQ6SJ93 734 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 SLC22A16Q86VW1 577 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 SPPL2CQ8IUH8 684 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 CLYBLQ8N0X4 340 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 CDC26Q8NHZ8 85 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 FCRL1Q96LA6 429 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 ZIM3Q96PE6 472 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 TTTY12Q9BZ98 90 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 IL1RL2Q9HB29 575 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms