RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 FAIM2Q9BWQ8 316 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 SPRTNQ9H040 489 aaPredicted RBP11.24□□□□□ -0.61
CCDC38-202ENST00000546386 EPS8L2Q9H6S3 715 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 KCMF1Q9P0J7 381 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 LRIT1Q9P2V4 623 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 NDOR1Q9UHB4 597 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 PILRAQ9UKJ1 303 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 CES1P1Q9UKY3 287 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 CNOT11Q9UKZ1 510 aaKnown RBP11.24□□□□□ -0.61
CCDC38-202ENST00000546386 AQP9O43315 295 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 CSF2P04141 144 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 ALOX12P18054 663 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 NDUFS1P28331 727 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 HSPA13P48723 471 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 PGDP52209 483 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 C21orf58P58505 322 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 ADARB1P78563 741 aaKnown RBP11.24□□□□□ -0.61
CCDC38-202ENST00000546386 GPR68Q15743 365 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 IKBIPQ70UQ0 350 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 OOSP2Q86WS3 158 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 SLC25A45Q8N413 288 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 MFSD2AQ8NA29 543 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 DNAJB8Q8NHS0 232 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 SLC22A18Q96BI1 424 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 NEURL3Q96EH8 262 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 DGCR6LQ9BY27 220 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 YY1AP1Q9H869 796 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 KRT84Q9NSB2 600 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 DAPP1Q9UN19 280 aa11.24□□□□□ -0.61
CCDC38-202ENST00000546386 A0A1W2PR77 199 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 CPED1A4D0V7 1026 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 ZIC2O95409 532 aaPredicted RBP11.23□□□□□ -0.61
CCDC38-202ENST00000546386 KRT75O95678 551 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 PCSK2P16519 638 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 PCSK6P29122 969 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 MPIP34949 423 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 CLK3P49761 638 aaKnown RBP11.23□□□□□ -0.61
CCDC38-202ENST00000546386 CCR5P51681 352 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 MVKQ03426 396 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 SLC13A2Q13183 592 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 VEZF1Q14119 521 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 SPATS1Q496A3 300 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 CCDC157Q569K6 752 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 C1orf189Q5VU69 101 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 MRM1Q6IN84 353 aaKnown RBP11.23□□□□□ -0.61
CCDC38-202ENST00000546386 MSANTD1Q6ZTZ1 278 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 ARMC8Q8IUR7 673 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 CCDC71Q8IV32 467 aaPredicted RBP11.23□□□□□ -0.61
CCDC38-202ENST00000546386 TBC1D19Q8N5T2 526 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 ZNF655Q8N720 491 aaPredicted RBP11.23□□□□□ -0.61
CCDC38-202ENST00000546386 TTLQ8NG68 377 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 OR4N2Q8NGD1 307 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 OR5K1Q8NHB7 308 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 ASB12Q8WXK4 309 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 ELP4Q96EB1 424 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 METTL2AQ96IZ6 378 aaKnown RBP11.23□□□□□ -0.61
CCDC38-202ENST00000546386 RAD21L1Q9H4I0 556 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 CLK4Q9HAZ1 481 aaKnown RBP11.23□□□□□ -0.61
CCDC38-202ENST00000546386 PNPLA3Q9NST1 481 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 POT1Q9NUX5 634 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 IFT80Q9P2H3 777 aaPredicted RBP11.23□□□□□ -0.61
CCDC38-202ENST00000546386 ZNF639Q9UID6 485 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 CDC14AQ9UNH5 594 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 LYVE1Q9Y5Y7 322 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 CUL9Q8IWT3 2517 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 KLHL33A6NCF5 533 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 B3GALT2O43825 422 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 HOXC4P09017 264 aaPredicted RBP11.23□□□□□ -0.61
CCDC38-202ENST00000546386 CPMP14384 443 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 DDX5P17844 614 aaKnown RBP11.23□□□□□ -0.61
CCDC38-202ENST00000546386 CSNK2A2P19784 350 aaPredicted RBP11.23□□□□□ -0.61
CCDC38-202ENST00000546386 SOX18P35713 384 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 PDX1P52945 283 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 PMS2P3Q13401 168 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 SEC23BQ15437 767 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 CNPY1Q3B7I2 92 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 LAIR2Q6ISS4 152 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 ERICH5Q6P6B1 374 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 DCUN1D5Q9BTE7 237 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 PDP2Q9P2J9 529 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 MRPS17Q9Y2R5 130 aaKnown RBP11.23□□□□□ -0.61
CCDC38-202ENST00000546386 BCAS1O75363 584 aaPredicted RBP11.23□□□□□ -0.61
CCDC38-202ENST00000546386 GASTP01350 101 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 ARAFP10398 606 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 MYF6P23409 242 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 ARHGDIAP52565 204 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 SUZ12Q15022 739 aaKnown RBP11.23□□□□□ -0.61
CCDC38-202ENST00000546386 ELOCQ15369 112 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 TMEM35AQ53FP2 167 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 IFI44LQ53G44 452 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 CCDC81Q6ZN84 652 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 P3H2Q8IVL5 708 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 MCATQ8IVS2 390 aaKnown RBP11.23□□□□□ -0.61
CCDC38-202ENST00000546386 LGI4Q8N135 537 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 CLIP4Q8N3C7 705 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 TTC29Q8NA56 475 aaPredicted RBP11.23□□□□□ -0.61
CCDC38-202ENST00000546386 OR6T1Q8NGN1 323 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 MMABQ96EY8 250 aaPredicted RBP11.23□□□□□ -0.61
CCDC38-202ENST00000546386 ZNF681Q96N22 645 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 OR7D2Q96RA2 312 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms