RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 KCNK10P57789 538 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 RHDQ02161 417 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 MGAT2Q10469 447 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 FUT7Q11130 342 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 EXOSC7Q15024 291 aaKnown RBP13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 MLC1Q15049 377 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 AGKQ53H12 422 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ANXA8L1Q5VT79 327 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 JMJD6Q6NYC1 403 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 HSDL2Q6YN16 418 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SLC29A4Q7RTT9 530 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SZRD1Q7Z422 152 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ANKRD46Q86W74 232 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 FDCSPQ8NFU4 85 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 OR7G2Q8NG99 324 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 OR7G1Q8NGA0 311 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 THAP3Q8WTV1 239 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 OR5P2Q8WZ92 322 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 CTHRC1Q96CG8 243 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SLC25A23Q9BV35 468 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 OR10A5Q9H207 317 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ANKRA2Q9H9E1 313 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 MRGBPQ9NV56 204 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 DDX18Q9NVP1 670 aaKnown RBP13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SNX8Q9Y5X2 465 aa13.47□□□□□ -0.25
TNFRSF1A-216ENST00000543995 LAMA5O15230 3695 aa13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 NR5A2O00482 541 aa13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SHOX2O60902 331 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 BCAS2O75934 225 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ZFAND5O76080 213 aa13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 CPSF4O95639 269 aaKnown RBP13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 CDK9P50750 372 aaKnown RBP13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 WNT3P56703 355 aa13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SOX8P57073 446 aa13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 MYBPC3Q14896 1274 aa13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 AGAP7PQ5VUJ5 663 aa13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 MTERF4Q7Z6M4 381 aaKnown RBP13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 CLECL1Q8IZS7 167 aa13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SLC5A8Q8N695 610 aa13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 OR52R1Q8NGF1 315 aa13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ERP27Q96DN0 273 aa13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ELP4Q96EB1 424 aa13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 AGAP4Q96P64 663 aa13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 GAL3ST4Q96RP7 486 aa13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 CCT8L2Q96SF2 557 aa13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 SEMA4CQ9C0C4 833 aa13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ZNF385DQ9H6B1 395 aa13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 FAM120CQ9NX05 1096 aaKnown RBP13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 TEKT2Q9UIF3 430 aa13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ZNF223Q9UK11 482 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF1A-216ENST00000543995 ANKRD11Q6UB99 2663 aaPredicted RBP13.46□□□□□ -0.26
TNFRSF1A-216ENST00000543995 PRSS51A0A1B0GVH4 220 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 CCDC154A6NI56 674 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 OR6C76A6NM76 312 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 MKRN2OSH3BPM6 223 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 PLOD2O00469 737 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 PLOD3O60568 738 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 PRAMEF2O60811 474 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 CCDC22O60826 627 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 CBX7O95931 251 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ALPPP05187 535 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 S1PR1P21453 382 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 SOAT1P35610 550 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ZFP36L2P47974 494 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 SLC37A1P57057 533 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 RNF4P78317 190 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 PHC1P78364 1004 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 UBAP2LQ14157 1087 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 SPDYE7PQ495Y7 208 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 TIGD2Q4W5G0 525 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 HLA-DQA1Q5Y7H0 255 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 B3GNTL1Q67FW5 361 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 FCRLBQ6BAA4 426 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 C9orf40Q8IXQ3 194 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 SIMC1Q8NDZ2 872 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 OR5L2Q8NGL0 311 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 OR4A15Q8NGL6 344 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 RMND5AQ9H871 391 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 C3orf14Q9HBI5 128 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 NEUROD4Q9HD90 331 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 TMEM45AQ9NWC5 275 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ZNF639Q9UID6 485 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 CFL2Q9Y281 166 aa13.45□□□□□ -0.26
TNFRSF1A-216ENST00000543995 A0A087WV62 115 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 C2orf92A0A1B0GVN3 265 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 PRKNO60260 465 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 COQ9O75208 318 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 CEACAM4O75871 244 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 FAM107AO95990 144 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 CLPSP04118 112 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 SOX18P35713 384 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 PRKAG1P54619 331 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 HBA1P69905 142 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 PRR5P85299 388 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 LRRC74AQ0VAA2 488 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 RCAN2Q14206 197 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 LINC00303Q3SY05 128 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 CRB2Q5IJ48 1285 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ABHD17BQ5VST6 288 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 BLOC1S3Q6QNY0 202 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms