RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 ANKRD26P1Q6NSI1 321 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 BLOC1S3Q6QNY0 202 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 TMEM64Q6YI46 380 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 RNF111Q6ZNA4 994 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 APCDD1LQ8NCL9 501 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 C17orf47Q8NEP4 570 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 OR9A2Q8NGT5 310 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 NUBPLQ8TB37 319 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 NCLNQ969V3 563 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 ELP4Q96EB1 424 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 WBP1Q96G27 269 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 THOC3Q96J01 351 aaKnown RBP11.34□□□□□ -0.59
DDX55-210ENST00000543016 ZNF354BQ96LW1 612 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 AGAP4Q96P64 663 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 OR52E6Q96RD3 313 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 LMF1Q96S06 567 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 CCT8L2Q96SF2 557 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 CNPPD1Q9BV87 410 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 DEFB126Q9BYW3 111 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 FAM107BQ9H098 131 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 ADNPQ9H2P0 1102 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 ZNF385DQ9H6B1 395 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 C3orf14Q9HBI5 128 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 NTMQ9P121 344 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 ERVK-19Q9WJR5 959 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 MKRN2OSH3BPM6 223 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 SCN2BO60939 215 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 S1PR1P21453 382 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 CCL11P51671 97 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 NME5P56597 212 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 WNT3P56703 355 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 SLC37A1P57057 533 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 PRR5P85299 388 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 Q0VFX4 171 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 RCAN2Q14206 197 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 MAPRE2Q15555 327 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 GKAP1Q5VSY0 366 aaPredicted RBP11.33□□□□□ -0.6
DDX55-210ENST00000543016 OR4F3Q6IEY1 312 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 ZCCHC12Q6PEW1 402 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 PAOXQ6QHF9 649 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 SLC29A4Q7RTT9 530 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 OR2L13Q8N349 312 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 TRIML2Q8N7C3 387 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 ZNF615Q8N8J6 731 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 ANKS4BQ8N8V4 417 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 DNAJB8Q8NHS0 232 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 GOT1L1Q8NHS2 421 aaPredicted RBP11.33□□□□□ -0.6
DDX55-210ENST00000543016 TP53INP1Q96A56 240 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 CIDECQ96AQ7 238 aaPredicted RBP11.33□□□□□ -0.6
DDX55-210ENST00000543016 MARK4Q96L34 752 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 TEX37Q96LM6 180 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 CCDC115Q96NT0 180 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 MESP1Q9BRJ9 268 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 NUDT9Q9BW91 350 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 OR10A5Q9H207 317 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 SLAMF7Q9NQ25 335 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 SAR1AQ9NR31 198 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 GPR83Q9NYM4 423 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 TAS2R9Q9NYW1 312 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 ABI3Q9P2A4 366 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 C19orf53Q9UNZ5 99 aaPredicted RBP11.33□□□□□ -0.6
DDX55-210ENST00000543016 ARL2BPQ9Y2Y0 163 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 PKD1L2Q7Z442 2459 aa11.33□□□□□ -0.6
DDX55-210ENST00000543016 CACNA1GO43497 2377 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 FREM2Q5SZK8 3169 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 TRBV11-1A0A0K0K1C0 115 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 MYOCOSA0A1B0GUC4 107 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 A0A1W2PS29 197 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 CCDC154A6NI56 674 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 EMC8O43402 210 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 KRT16P08779 473 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 IL12AP29459 219 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 MAGEA8P43361 318 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 TRPC1P48995 793 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 RNF4P78317 190 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 TXNL4AP83876 142 aaKnown RBP11.32□□□□□ -0.6
DDX55-210ENST00000543016 DUSP2Q05923 314 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 HSPB3Q12988 150 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 MAPKAPK3Q16644 382 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 MEP1AQ16819 746 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 COL28A1Q2UY09 1125 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 AGKQ53H12 422 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 FHL5Q5TD97 284 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 HLA-DQA1Q5Y7H0 255 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 FAM180BQ6P0A1 224 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 FAM111BQ6SJ93 734 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 ISLR2Q6UXK2 745 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 DGAT2L6Q6ZPD8 337 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 ZNF551Q7Z340 670 aaPredicted RBP11.32□□□□□ -0.6
DDX55-210ENST00000543016 RPS19BP1Q86WX3 136 aaKnown RBP11.32□□□□□ -0.6
DDX55-210ENST00000543016 SLC15A4Q8N697 577 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 ADCY4Q8NFM4 1077 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 OR56A1Q8NGH5 318 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 SFXN5Q8TD22 340 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 BRIX1Q8TDN6 353 aaKnown RBP11.32□□□□□ -0.6
DDX55-210ENST00000543016 PSMF1Q92530 271 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 TM9SF4Q92544 642 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 SPDL1Q96EA4 605 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 ITCHQ96J02 903 aa11.32□□□□□ -0.6
DDX55-210ENST00000543016 ARHGAP9Q9BRR9 750 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms