RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 SPANXN2Q5MJ10 180 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 DCST1Q5T197 706 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 C9orf64Q5T6V5 341 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 KIAA1211LQ6NV74 962 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 TMEM53Q6P2H8 277 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 TRMT11Q7Z4G4 463 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 C6orf120Q7Z4R8 191 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 WDR53Q7Z5U6 358 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 PDZD3Q86UT5 571 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 KRT73Q86Y46 540 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 TRAPPC5Q8IUR0 188 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 DCUN1D3Q8IWE4 304 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 TAGAPQ8N103 731 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 TBC1D19Q8N5T2 526 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ANKRD53Q8N9V6 530 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 OR13H1Q8NG92 308 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 OR8J1Q8NGP2 316 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 RASSF5Q8WWW0 418 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 SMPDL3AQ92484 453 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 NUS1Q96E22 293 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 COX14Q96I36 57 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ZSWIM3Q96MP5 696 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 IL17FQ96PD4 163 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 TEFMQ96QE5 360 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 OR2A14Q96R47 310 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 SLC30A2Q9BRI3 323 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ASPNQ9BXN1 380 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 POLDIP3Q9BY77 421 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 NUAK2Q9H093 628 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 TMEM165Q9HC07 324 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 MOV10Q9HCE1 1003 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 SMURF1Q9HCE7 757 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ACSS1Q9NUB1 689 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 MRPS18AQ9NVS2 196 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 NDUFB11Q9NX14 153 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 TOR4AQ9NXH8 423 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 TESQ9UGI8 421 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 CLEC2DQ9UHP7 191 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ADAM29Q9UKF5 820 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 POU2F3Q9UKI9 436 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 TBC1D24Q9ULP9 559 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 TMCC3Q9ULS5 477 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 A4GNTQ9UNA3 340 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 STUB1Q9UNE7 303 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ATP11BQ9Y2G3 1177 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 MSRB2Q9Y3D2 182 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 RPL36Q9Y3U8 105 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 PCYT1BQ9Y5K3 369 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 SNX11Q9Y5W9 270 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 HCFC2Q9Y5Z7 792 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 V9GYH0 126 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 COL6A3P12111 3177 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 DENND4AQ7Z401 1863 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 A0A1W2PPV9 198 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ANKDD1BA6NHY2 528 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 PDZK1P1A8MUH7 402 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ANHXE9PGG2 379 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 RGS13O14921 159 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 KIAA0355O15063 1070 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 PDPK1O15530 556 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 SEC14L5O43304 696 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ASNA1O43681 348 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 CYP17A1P05093 508 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 CXCR2P25025 360 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ITGB8P26012 769 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 POU1F1P28069 291 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 CA8P35219 290 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 BMPR1AP36894 532 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 HSD17B2P37059 387 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 MAPK12P53778 367 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 MANFP55145 182 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ERVFC1P60507 584 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 RPS26P62854 115 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 TRA2BP62995 288 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 PSPHP78330 225 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 HTRA4P83105 476 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 IFITM2Q01629 132 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 BNC1Q01954 994 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 COX10Q12887 443 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 GPR50Q13585 617 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 TSTA3Q13630 321 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 NDUFA9Q16795 377 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 LRRC26Q2I0M4 334 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ENTPD8Q5MY95 495 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ZNF362Q5T0B9 420 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 SAMD5Q5TGI4 173 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 AGAP6Q5VW22 663 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 RAET1GQ6H3X3 334 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 TNFAIP8L2Q6P589 184 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 TMC5Q6UXY8 1006 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ADAMTSL4Q6UY14 1074 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ERN2Q76MJ5 926 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 UBE3DQ7Z6J8 389 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 MRGPREQ86SM8 312 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 COMTD1Q86VU5 262 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 C17orf64Q86WR6 236 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 C12orf40Q86WS4 652 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 TRIM69Q86WT6 500 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 RBM45Q8IUH3 476 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 SLITRK4Q8IW52 837 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms