RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 SENP1Q9P0U3 644 aa10.64□□□□□ -0.71
C2CD3-217ENST00000542452 KLF13Q9Y2Y9 288 aaPredicted RBP10.64□□□□□ -0.71
C2CD3-217ENST00000542452 DIDO1Q9BTC0 2240 aaKnown RBP10.64□□□□□ -0.71
C2CD3-217ENST00000542452 NCOA6Q14686 2063 aaPredicted RBP10.63□□□□□ -0.71
C2CD3-217ENST00000542452 OR6C76A6NM76 312 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 NPIPA5E9PKD4 350 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 PIP5K1BO14986 540 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 ITM2AO43736 263 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 DYRK3O43781 588 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 GUCY1B2O75343 617 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 LRATO95237 230 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 STSP08842 583 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 PCSK2P16519 638 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 ZNF24P17028 368 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 DEKP35659 375 aaKnown RBP10.63□□□□□ -0.71
C2CD3-217ENST00000542452 SERPINB4P48594 390 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 ALDH6A1Q02252 535 aaKnown RBP10.63□□□□□ -0.71
C2CD3-217ENST00000542452 ELOAQ14241 798 aaKnown RBP10.63□□□□□ -0.71
C2CD3-217ENST00000542452 NNATQ16517 81 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 ZNF791Q3KP31 576 aaPredicted RBP10.63□□□□□ -0.71
C2CD3-217ENST00000542452 TRMT12Q53H54 448 aaKnown RBP10.63□□□□□ -0.71
C2CD3-217ENST00000542452 XKR7Q5GH72 579 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 SPDYAQ5MJ70 313 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 C1QL3Q5VWW1 255 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 LRIG3Q6UXM1 1119 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 GFRALQ6UXV0 394 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 RTL4Q6ZR62 310 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 SLC29A4Q7RTT9 530 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 LRRC25Q8N386 305 aaPredicted RBP10.63□□□□□ -0.71
C2CD3-217ENST00000542452 VWA5B2Q8N398 1253 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 ZFP62Q8NB50 900 aaPredicted RBP10.63□□□□□ -0.71
C2CD3-217ENST00000542452 OR2M7Q8NG81 312 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 OR9A2Q8NGT5 310 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 C16orf52Q8NHV5 167 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 TMEM125Q96AQ2 219 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 SPACA9Q96E40 222 aaPredicted RBP10.63□□□□□ -0.71
C2CD3-217ENST00000542452 EGLN2Q96KS0 407 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 ITPAQ9BY32 194 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 BRINP2Q9C0B6 783 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 ZNF395Q9H8N7 513 aaPredicted RBP10.63□□□□□ -0.71
C2CD3-217ENST00000542452 PROK2Q9HC23 129 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 SSU72Q9NP77 194 aaKnown RBP10.63□□□□□ -0.71
C2CD3-217ENST00000542452 TIMMDC1Q9NPL8 285 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 RRAGDQ9NQL2 400 aaPredicted RBP10.63□□□□□ -0.71
C2CD3-217ENST00000542452 SEC14L3Q9UDX4 400 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 ZDHHC2Q9UIJ5 367 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 NPIPA1Q9UND3 350 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 ERVK-11Q9UQG0 969 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 ZNF407Q9C0G0 2248 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 SPTBN1Q01082 2364 aaKnown RBP10.63□□□□□ -0.71
C2CD3-217ENST00000542452 COL12A1Q99715 3063 aa10.63□□□□□ -0.71
C2CD3-217ENST00000542452 GOLGA6L10A6NI86 522 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 LSM1O15116 133 aaKnown RBP10.62□□□□□ -0.71
C2CD3-217ENST00000542452 CTIFO43310 598 aaKnown RBP10.62□□□□□ -0.71
C2CD3-217ENST00000542452 HS6ST1O60243 411 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 JUNP05412 331 aaKnown RBP10.62□□□□□ -0.71
C2CD3-217ENST00000542452 FGF4P08620 206 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 FBXO45P0C2W1 286 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 LINC00032P0C843 101 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 DRD2P14416 443 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 SDC1P18827 310 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 CSNK2A2P19784 350 aaPredicted RBP10.62□□□□□ -0.71
C2CD3-217ENST00000542452 DDCP20711 480 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 DNASE1L1P49184 302 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 RPL38P63173 70 aaKnown RBP10.62□□□□□ -0.71
C2CD3-217ENST00000542452 GTF3C1Q12789 2109 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 MAP4K2Q12851 820 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 ZNF385BQ569K4 471 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 CMPK2Q5EBM0 449 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 SH2D4BQ5SQS7 431 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 DESI1Q6ICB0 168 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 NOXRED1Q6NXP6 359 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 OPN5Q6U736 354 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 TICAM1Q8IUC6 712 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 CCDC116Q8IYX3 515 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 PRR22Q8IZ63 422 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 GOLM1Q8NBJ4 401 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 FAM98AQ8NCA5 519 aaKnown RBP10.62□□□□□ -0.71
C2CD3-217ENST00000542452 OR10G3Q8NGC4 313 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 OR52R1Q8NGF1 315 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 SLC22A8Q8TCC7 542 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 ZNF675Q8TD23 568 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 SSC4DQ8WTU2 575 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 KAT2AQ92830 837 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 PGM2Q96G03 612 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 C3orf30Q96M34 536 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 PSMG3-AS1Q96PY0 264 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 C20orf27Q9GZN8 174 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 NXF5Q9H1B4 397 aaKnown RBP10.62□□□□□ -0.71
C2CD3-217ENST00000542452 CENPHQ9H3R5 247 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 LRTM1Q9HBL6 345 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.62□□□□□ -0.71
C2CD3-217ENST00000542452 CNOT11Q9UKZ1 510 aaKnown RBP10.62□□□□□ -0.71
C2CD3-217ENST00000542452 SLC5A6Q9Y289 635 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 TRAF6Q9Y4K3 522 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 LIPGQ9Y5X9 500 aa10.62□□□□□ -0.71
C2CD3-217ENST00000542452 CHCHD2Q9Y6H1 151 aaPredicted RBP10.62□□□□□ -0.71
C2CD3-217ENST00000542452 UTP20O75691 2785 aaKnown RBP10.62□□□□□ -0.71
C2CD3-217ENST00000542452 NINQ8N4C6 2090 aa10.61□□□□□ -0.71
C2CD3-217ENST00000542452 C2orf92A0A1B0GVN3 265 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms