RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 RPS26P11Q5JNZ5 115 aaPredicted RBP10.34□□□□□ -0.75
SCG3-202ENST00000542355 PRAMEF17Q5VTA0 474 aa10.34□□□□□ -0.75
SCG3-202ENST00000542355 REEP3Q6NUK4 255 aa10.34□□□□□ -0.75
SCG3-202ENST00000542355 TMEM71Q6P5X7 295 aa10.34□□□□□ -0.75
SCG3-202ENST00000542355 TMPRSS9Q7Z410 1059 aa10.34□□□□□ -0.75
SCG3-202ENST00000542355 ZDHHC21Q8IVQ6 265 aa10.34□□□□□ -0.75
SCG3-202ENST00000542355 D2HGDHQ8N465 521 aa10.34□□□□□ -0.75
SCG3-202ENST00000542355 FAM181AQ8N9Y4 354 aa10.34□□□□□ -0.75
SCG3-202ENST00000542355 OR56A1Q8NGH5 318 aa10.34□□□□□ -0.75
SCG3-202ENST00000542355 SFXN5Q8TD22 340 aa10.34□□□□□ -0.75
SCG3-202ENST00000542355 MOAP1Q96BY2 351 aa10.34□□□□□ -0.75
SCG3-202ENST00000542355 TMEM19Q96HH6 336 aa10.34□□□□□ -0.75
SCG3-202ENST00000542355 C9orf16Q9BUW7 83 aa10.34□□□□□ -0.75
SCG3-202ENST00000542355 A4GALTQ9NPC4 353 aa10.34□□□□□ -0.75
SCG3-202ENST00000542355 IL1RAPQ9NPH3 570 aa10.34□□□□□ -0.75
SCG3-202ENST00000542355 EQTNQ9NQ60 294 aa10.34□□□□□ -0.75
SCG3-202ENST00000542355 DDX18Q9NVP1 670 aaKnown RBP10.34□□□□□ -0.75
SCG3-202ENST00000542355 SEMA5BQ9P283 1151 aa10.34□□□□□ -0.75
SCG3-202ENST00000542355 RAB23Q9ULC3 237 aa10.34□□□□□ -0.75
SCG3-202ENST00000542355 LRCH1Q9Y2L9 728 aa10.34□□□□□ -0.75
SCG3-202ENST00000542355 FITM1A5D6W6 292 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 TMEM229AB2RXF0 380 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 hCG_2039718K7EN88 272 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 AGRPO00253 132 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 PGM3O95394 542 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 SYPP08247 313 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 UQCRBP14927 111 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 NELFEP18615 380 aaKnown RBP10.33□□□□□ -0.76
SCG3-202ENST00000542355 AVPR1BP47901 424 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 IST1P53990 364 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 CCL7P80098 99 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 PPP1R8Q12972 351 aaKnown RBP10.33□□□□□ -0.76
SCG3-202ENST00000542355 SYPL1Q16563 259 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 ZNF574Q6ZN55 896 aaPredicted RBP10.33□□□□□ -0.76
SCG3-202ENST00000542355 PRR23CQ6ZRP0 262 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 CCDC80Q76M96 950 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 ATCAYQ86WG3 371 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 SMYD1Q8NB12 490 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 SIMC1Q8NDZ2 872 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 OR7G2Q8NG99 324 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 TMBIM1Q969X1 311 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 ANKRD9Q96BM1 317 aaPredicted RBP10.33□□□□□ -0.76
SCG3-202ENST00000542355 TAMM41Q96BW9 452 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 SLC41A2Q96JW4 573 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 DOHHQ9BU89 302 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 ARRDC1-AS1Q9H2J1 176 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 DNAJB9Q9UBS3 223 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 TMEM184BQ9Y519 407 aaPredicted RBP10.33□□□□□ -0.76
SCG3-202ENST00000542355 MAU2Q9Y6X3 613 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 TMEM131Q92545 1883 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 A0A1W2PQM1 296 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 PRAMEF27A3QJZ7 478 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 H3BMH7 237 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 SLC28A2O43868 658 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 PRSS23O95084 383 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 IFNA14P01570 189 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 RPLP0P05388 317 aaKnown RBP10.33□□□□□ -0.76
SCG3-202ENST00000542355 FABP3P05413 133 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 RNH1P13489 461 aaKnown RBP10.33□□□□□ -0.76
SCG3-202ENST00000542355 HOXB6P17509 224 aaKnown RBP10.33□□□□□ -0.76
SCG3-202ENST00000542355 NT5EP21589 574 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 CLCN2P51788 898 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 PCBP3P57721 371 aaKnown RBP10.33□□□□□ -0.76
SCG3-202ENST00000542355 KCNJ10P78508 379 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 VLDLRP98155 873 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 SLC13A2Q13183 592 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 MAPK11Q15759 364 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 C21orf62-AS1Q17RA5 79 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 FAM214AQ32MH5 1076 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 CYP27C1Q4G0S4 372 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 TRMT12Q53H54 448 aaKnown RBP10.33□□□□□ -0.76
SCG3-202ENST00000542355 CMPK2Q5EBM0 449 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 CRB2Q5IJ48 1285 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 OTUD3Q5T2D3 398 aaPredicted RBP10.33□□□□□ -0.76
SCG3-202ENST00000542355 NIPAL1Q6NVV3 410 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 FAM111BQ6SJ93 734 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 TBPL2Q6SJ96 375 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 TTLL10Q6ZVT0 673 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 PRSS42Q7Z5A4 293 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 THNSL2Q86YJ6 484 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 SLC30A8Q8IWU4 369 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 OR1L3Q8NH93 324 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 BTBD9Q96Q07 612 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 SYNDIG1Q9H7V2 258 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 CUTCQ9NTM9 273 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 THUMPD1Q9NXG2 353 aaKnown RBP10.33□□□□□ -0.76
SCG3-202ENST00000542355 P2RX2Q9UBL9 471 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 BAG5Q9UL15 447 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 ABCG2Q9UNQ0 655 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 MAGED1Q9Y5V3 778 aaPredicted RBP10.33□□□□□ -0.76
SCG3-202ENST00000542355 U3KQV3 271 aa10.33□□□□□ -0.76
SCG3-202ENST00000542355 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.32□□□□□ -0.76
SCG3-202ENST00000542355 TMEM247A6NEH6 219 aa10.32□□□□□ -0.76
SCG3-202ENST00000542355 OR2W5A6NFC9 320 aa10.32□□□□□ -0.76
SCG3-202ENST00000542355 PLOD2O00469 737 aa10.32□□□□□ -0.76
SCG3-202ENST00000542355 PCDHGA12O60330 932 aa10.32□□□□□ -0.76
SCG3-202ENST00000542355 DIRAS1O95057 198 aa10.32□□□□□ -0.76
SCG3-202ENST00000542355 CPNE6O95741 557 aa10.32□□□□□ -0.76
SCG3-202ENST00000542355 SEMG1P04279 462 aa10.32□□□□□ -0.76
SCG3-202ENST00000542355 ATP1B1P05026 303 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms