RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 SHARPINQ9H0F6 387 aa8.93□□□□□ -0.98
CHFR-220ENST00000541817 MMADHCQ9H3L0 296 aaPredicted RBP8.93□□□□□ -0.98
CHFR-220ENST00000541817 CXorf56Q9H5V9 222 aa8.93□□□□□ -0.98
CHFR-220ENST00000541817 DCLRE1BQ9H816 532 aa8.93□□□□□ -0.98
CHFR-220ENST00000541817 FBXO6Q9NRD1 293 aaPredicted RBP8.93□□□□□ -0.98
CHFR-220ENST00000541817 SNX15Q9NRS6 342 aa8.93□□□□□ -0.98
CHFR-220ENST00000541817 SACM1LQ9NTJ5 587 aa8.93□□□□□ -0.98
CHFR-220ENST00000541817 SLC6A5Q9Y345 797 aa8.93□□□□□ -0.98
CHFR-220ENST00000541817 YLPM1P49750 1951 aaKnown RBP8.93□□□□□ -0.98
CHFR-220ENST00000541817 NINQ8N4C6 2090 aa8.93□□□□□ -0.98
CHFR-220ENST00000541817 A0A096LPK6 155 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 TCRBV16S1A1N1A0A5B0 115 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 TMEM114B3SHH9 223 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 LCMT2O60294 686 aaKnown RBP8.92□□□□□ -0.98
CHFR-220ENST00000541817 PEX11AO75192 247 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 NDUFS7O75251 213 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 ALDOAP04075 364 aaKnown RBP8.92□□□□□ -0.98
CHFR-220ENST00000541817 P04436 131 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 ENO1P06733 434 aaKnown RBP8.92□□□□□ -0.98
CHFR-220ENST00000541817 PAMP19021 973 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 CRYGSP22914 178 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 CDKN1AP38936 164 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 MC3RP41968 323 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 MAGEA12P43365 314 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 CCNG1P51959 295 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 ALDH18A1P54886 795 aaKnown RBP8.92□□□□□ -0.98
CHFR-220ENST00000541817 CRYZQ08257 329 aaKnown RBP8.92□□□□□ -0.98
CHFR-220ENST00000541817 ASPHQ12797 758 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 PCLAFQ15004 111 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 TSNAXIP1Q2TAA8 658 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 DNAL1Q4LDG9 190 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 DCST1Q5T197 706 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 TEDDM1Q5T9Z0 273 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 ARMC3Q5W041 872 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 ANKRD34AQ69YU3 496 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 ZCCHC23Q6ZST2 131 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 LCA5Q86VQ0 697 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 GCNT2Q8N0V5 402 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.92□□□□□ -0.98
CHFR-220ENST00000541817 OR9A1PQ8NGU1 263 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 STYXQ8WUJ0 223 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 STMN2Q93045 179 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 FAM136AQ96C01 138 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 MED18Q9BUE0 208 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 NMUR2Q9GZQ4 415 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 ZNF703Q9H7S9 590 aaPredicted RBP8.92□□□□□ -0.98
CHFR-220ENST00000541817 YY1AP1Q9H869 796 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 IARS2Q9NSE4 1012 aaKnown RBP8.92□□□□□ -0.98
CHFR-220ENST00000541817 TMEM216Q9P0N5 145 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 SPATA7Q9P0W8 599 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 SLC17A6Q9P2U8 582 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 MARCOQ9UEW3 520 aaPredicted RBP8.92□□□□□ -0.98
CHFR-220ENST00000541817 EMCNQ9ULC0 261 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 LAMP3Q9UQV4 416 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 PSAT1Q9Y617 370 aa8.92□□□□□ -0.98
CHFR-220ENST00000541817 MBD3L3A6NE82 208 aaPredicted RBP8.91□□□□□ -0.98
CHFR-220ENST00000541817 TRIM13O60858 407 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 ZFAND5O76080 213 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 HSPA4LO95757 839 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 GOT2P00505 430 aaKnown RBP8.91□□□□□ -0.98
CHFR-220ENST00000541817 SRD5A1P18405 259 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 IDUAP35475 653 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 HK2P52789 917 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 CLNS1AP54105 237 aaKnown RBP8.91□□□□□ -0.98
CHFR-220ENST00000541817 PNLIPRP1P54315 467 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 TAF11Q15544 211 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 DEFB134Q4QY38 66 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 HSP90AA5PQ58FG0 334 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 THEMIS2Q5TEJ8 643 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 HECTD2Q5U5R9 776 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 VASNQ6EMK4 673 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 RAPH1Q70E73 1250 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 C10orf107Q8IVU9 208 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 GPALPP1Q8IXQ4 340 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 ZNF321PQ8N8H1 164 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 MBD3L2Q8NHZ7 208 aaPredicted RBP8.91□□□□□ -0.98
CHFR-220ENST00000541817 RDH11Q8TC12 318 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 INTS12Q96CB8 462 aaKnown RBP8.91□□□□□ -0.98
CHFR-220ENST00000541817 VMP1Q96GC9 406 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 MARK4Q96L34 752 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 PKP4Q99569 1192 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 SLC30A3Q99726 388 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 KIFC1Q9BW19 673 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 CCDC106Q9BWC9 280 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 DENND2DQ9H6A0 471 aaPredicted RBP8.91□□□□□ -0.98
CHFR-220ENST00000541817 BATF3Q9NR55 127 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 UTP6Q9NYH9 597 aaKnown RBP8.91□□□□□ -0.98
CHFR-220ENST00000541817 ZNF226Q9NYT6 803 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 TAS2R1Q9NYW7 299 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 MYOTQ9UBF9 498 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 STOML1Q9UBI4 398 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 SLC2A6Q9UGQ3 507 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 SH2B3Q9UQQ2 575 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 PCDHGB3Q9Y5G1 929 aa8.91□□□□□ -0.98
CHFR-220ENST00000541817 TENM1Q9UKZ4 2725 aa8.9□□□□□ -0.98
CHFR-220ENST00000541817 IGKV3D-11A0A0A0MRZ8 115 aa8.9□□□□□ -0.98
CHFR-220ENST00000541817 ZCWPW2A0A1B0GU75 182 aa8.9□□□□□ -0.98
CHFR-220ENST00000541817 SERINC4A6NH21 518 aa8.9□□□□□ -0.98
CHFR-220ENST00000541817 LRRC3CA6NJW4 275 aa8.9□□□□□ -0.98
CHFR-220ENST00000541817 CAPN14A8MX76 684 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms