RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 FHP07954 510 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 IL10P22301 178 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 SESN3P58005 492 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 DSTNP60981 165 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 TXNL4AP83876 142 aaKnown RBP13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 PRR5P85299 388 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 ZNF630Q2M218 657 aaPredicted RBP13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 TMEM107Q6UX40 140 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 CEACAM20Q6UY09 585 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 TTLL10Q6ZVT0 673 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 MED25Q71SY5 747 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 SLC30A8Q8IWU4 369 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 OR4N5Q8IXE1 308 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 SHISA5Q8N114 240 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 EID3Q8N140 333 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 PAPD5Q8NDF8 572 aaKnown RBP13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 ANKRD9Q96BM1 317 aaPredicted RBP13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 PEX11GQ96HA9 241 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 C3orf14Q9HBI5 128 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 DCAF13Q9NV06 445 aaKnown RBP13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 NTMQ9P121 344 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 SRPK3Q9UPE1 567 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 TMEM184BQ9Y519 407 aaPredicted RBP13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 IGSF10Q6WRI0 2623 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 FASNP49327 2511 aaKnown RBP13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 CLDN4O14493 209 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 CTNSO60931 367 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 ARAFP10398 606 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 KDELR2P33947 212 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 PRIM2P49643 509 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 ANXA11P50995 505 aaKnown RBP13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 IGLV3-21P80748 117 aaPredicted RBP13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 MAT1AQ00266 395 aaKnown RBP13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 EEF1A2Q05639 463 aaKnown RBP13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 TP53BP2Q13625 1128 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 COL9A2Q14055 689 aaPredicted RBP13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 C16orf72Q14CZ0 275 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 ZNF628Q5EBL2 1059 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 TBCELQ5QJ74 424 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 HORMAD2Q8N7B1 307 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 RCBTB1Q8NDN9 531 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 OR51Q1Q8NH59 317 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 MIPOL1Q8TD10 442 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 ZNF675Q8TD23 568 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 OR1F2PQ96R84 312 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 UGT2B28Q9BY64 529 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 ASPSCR1Q9BZE9 553 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 SIDT1Q9NXL6 827 aaKnown RBP13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 RIMS3Q9UJD0 308 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 SAMD4AQ9UPU9 718 aaKnown RBP13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 AURKCQ9UQB9 309 aa13.36□□□□□ -0.27
CYB561A3-216ENST00000540755 FER1L5A0AVI2 2057 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 BAHCC1Q9P281 2608 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 A0A1B0GX78 115 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 HNRNPRO43390 633 aaKnown RBP13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 BMP10O95393 424 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 SERPINA1P01009 418 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 SLC35E2P0CK97 266 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 ACADSP16219 412 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 MATN1P21941 496 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 MC3RP41968 323 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 CASP9P55211 416 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 HSD17B7P56937 341 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 CDK6Q00534 326 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 ZFP36L1Q07352 338 aaKnown RBP13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 SCARB2Q14108 478 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 DSG2Q14126 1118 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 LTB4RQ15722 352 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 SYT16Q17RD7 645 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 FAM98BQ52LJ0 330 aaKnown RBP13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 INTS11Q5TA45 600 aaKnown RBP13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 CCDC80Q76M96 950 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 LILRA2Q8N149 483 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 METTL27Q8N6F8 245 aaPredicted RBP13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 NUP43Q8NFH3 380 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 NRG4Q8WWG1 115 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 MAL2Q969L2 176 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 COL26A1Q96A83 441 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 SERHL2Q9H4I8 314 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 MAGIXQ9H6Y5 334 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 A4GALTQ9NPC4 353 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 PRTFDC1Q9NRG1 225 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 PTGFRNQ9P2B2 879 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 DHCR7Q9UBM7 475 aaKnown RBP13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 RPS6KA6Q9UK32 745 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 RARRES3Q9UL19 164 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 ANGPT4Q9Y264 503 aa13.35□□□□□ -0.27
CYB561A3-216ENST00000540755 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.34□□□□□ -0.27
CYB561A3-216ENST00000540755 A0A087WV62 115 aa13.34□□□□□ -0.27
CYB561A3-216ENST00000540755 UPK1AO00322 258 aa13.34□□□□□ -0.27
CYB561A3-216ENST00000540755 HMGN4O00479 90 aa13.34□□□□□ -0.27
CYB561A3-216ENST00000540755 RAP2AP10114 183 aa13.34□□□□□ -0.27
CYB561A3-216ENST00000540755 FCGR1AP12314 374 aa13.34□□□□□ -0.27
CYB561A3-216ENST00000540755 ALAS2P22557 587 aa13.34□□□□□ -0.27
CYB561A3-216ENST00000540755 PTGER1P34995 402 aa13.34□□□□□ -0.27
CYB561A3-216ENST00000540755 XCR1P46094 333 aa13.34□□□□□ -0.27
CYB561A3-216ENST00000540755 KHKP50053 298 aa13.34□□□□□ -0.27
CYB561A3-216ENST00000540755 MAPK10P53779 464 aa13.34□□□□□ -0.27
CYB561A3-216ENST00000540755 RPS26P62854 115 aaKnown RBP13.34□□□□□ -0.27
CYB561A3-216ENST00000540755 ID2Q02363 134 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms