RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 DEPPQ9NTK1 212 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 HPF1Q9NWY4 346 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 ERVK-11Q9UQG0 969 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 DTX4Q9Y2E6 619 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 CROCCQ5TZA2 2017 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 TMEM120BA0PK00 339 aa16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 CBX7O95931 251 aa16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 CRYABP02511 175 aaKnown RBP16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 NEFHP12036 1026 aa16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 EDN3P14138 238 aa16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 PCSK2P16519 638 aa16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 DDCP20711 480 aa16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 GSTM5P46439 218 aa16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 ABCE1P61221 599 aaKnown RBP16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 RPL38P63173 70 aaKnown RBP16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 MRPS35P82673 323 aaKnown RBP16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 CEBPEQ15744 281 aa16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 TRMT12Q53H54 448 aaKnown RBP16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 XKR7Q5GH72 579 aa16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 TICAM1Q8IUC6 712 aa16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 SULF2Q8IWU5 870 aa16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 CPSF7Q8N684 471 aaKnown RBP16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 C16orf52Q8NHV5 167 aa16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 PRR7Q8TB68 274 aa16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 ADIPOR1Q96A54 375 aa16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 ANKRA2Q9H9E1 313 aa16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 PFDN4Q9NQP4 134 aa16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 SLC35C2Q9NQQ7 365 aa16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 EHD3Q9NZN3 535 aa16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 ESPL1Q14674 2120 aa16.91■□□□□ 0.3
SNRPA1-203ENST00000540017 A0A0G2JMM0 328 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 C2orf92A0A1B0GVN3 265 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 ATP6AP2A0A1C7CYW4 349 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 A0A1W2PPB8 328 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 A0A1W2PRS3 328 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 KIR3DP1A8MWS1 328 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 PEX1O43933 1283 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 SKAP2O75563 359 aaPredicted RBP16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 ATP6AP2O75787 350 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 HSPA4LO95757 839 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 JUNP05412 331 aaKnown RBP16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 SDC1P18827 310 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 GPR85P60893 370 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 ZNF791Q3KP31 576 aaPredicted RBP16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 GALNTL6Q49A17 601 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 ZNF628Q5EBL2 1059 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 TMEM64Q6YI46 380 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 GPALPP1Q8IXQ4 340 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 ZNF781Q8N8C0 355 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 PSD4Q8NDX1 1056 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 OR7G1Q8NGA0 311 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 OR9A2Q8NGT5 310 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 KAT2AQ92830 837 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 GFM2Q969S9 779 aaKnown RBP16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 ARL8AQ96BM9 186 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 SORT1Q99523 831 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 PAIP2Q9BPZ3 127 aaKnown RBP16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 STMN4Q9H169 189 aaPredicted RBP16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 TSPAN10Q9H1Z9 355 aaPredicted RBP16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 TAS2R7Q9NYW3 318 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 BAIAP2L1Q9UHR4 511 aa16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 KLF13Q9Y2Y9 288 aaPredicted RBP16.9■□□□□ 0.3
SNRPA1-203ENST00000540017 SVILO95425 2214 aa16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 RP1L1Q8IWN7 2480 aaPredicted RBP16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 PINLYPA6NC86 204 aa16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 MYO1GB0I1T2 1018 aa16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 TMEM114B3SHH9 223 aa16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 G3V3Y1 287 aa16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 PEX11AO75192 247 aa16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 SEMA7AO75326 666 aa16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 NME6O75414 186 aaPredicted RBP16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 GPX3P22352 226 aa16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 RFC3P40938 356 aa16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 MEOX1P50221 254 aa16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 NR0B1P51843 470 aaKnown RBP16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 KCNK10P57789 538 aa16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 C6orf163Q5TEZ5 329 aa16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 OPN5Q6U736 354 aa16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 SIAH3Q8IW03 269 aa16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 CLHC1Q8NHS4 586 aa16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 SLC22A8Q8TCC7 542 aa16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 ZNF675Q8TD23 568 aa16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 MGARPQ8TDB4 240 aa16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 TSSK3Q96PN8 268 aa16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 CCT7Q99832 543 aa16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 TIMMDC1Q9NPL8 285 aa16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 BCAP29Q9UHQ4 241 aa16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 WBP11Q9Y2W2 641 aaKnown RBP16.89■□□□□ 0.29
SNRPA1-203ENST00000540017 EML6Q6ZMW3 1958 aa16.88■□□□□ 0.29
SNRPA1-203ENST00000540017 AKAP10O43572 662 aa16.88■□□□□ 0.29
SNRPA1-203ENST00000540017 LRATO95237 230 aa16.88■□□□□ 0.29
SNRPA1-203ENST00000540017 CCL3P10147 92 aa16.88■□□□□ 0.29
SNRPA1-203ENST00000540017 BCKDHAP12694 445 aa16.88■□□□□ 0.29
SNRPA1-203ENST00000540017 SLC1A6P48664 564 aa16.88■□□□□ 0.29
SNRPA1-203ENST00000540017 ZNF385BQ569K4 471 aa16.88■□□□□ 0.29
SNRPA1-203ENST00000540017 HHATQ5VTY9 493 aa16.88■□□□□ 0.29
SNRPA1-203ENST00000540017 ANKRD26P1Q6NSI1 321 aa16.88■□□□□ 0.29
SNRPA1-203ENST00000540017 RTL4Q6ZR62 310 aa16.88■□□□□ 0.29
SNRPA1-203ENST00000540017 IKBIPQ70UQ0 350 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms