RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ZNF354BQ96LW1 612 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 TAPBPLQ9BX59 468 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 CDCA4Q9BXL8 241 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 NXF2Q9GZY0 626 aaKnown RBP13.28□□□□□ -0.28
UBE3B-210ENST00000539599 A4GALTQ9NPC4 353 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 FBXL12Q9NXK8 326 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 ANKMY1Q9P2S6 941 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 LSM2Q9Y333 95 aaKnown RBP13.28□□□□□ -0.28
UBE3B-210ENST00000539599 C17orf113A0A1B0GUU1 675 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 A0A1W2PP55 124 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 EFCAB10A6NFE3 127 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 UGT2B17O75795 530 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 PCSK2P16519 638 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 CERS1P27544 350 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 TNFSF8P32971 234 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 ETV5P41161 510 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 ETV1P50549 477 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 INSL4Q14641 139 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 LTB4RQ15722 352 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 FAM109BQ6ICB4 259 aaPredicted RBP13.28□□□□□ -0.28
UBE3B-210ENST00000539599 CASP12Q6UXS9 341 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 IKBIPQ70UQ0 350 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 NUDT13Q86X67 352 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 REM2Q8IYK8 340 aaPredicted RBP13.28□□□□□ -0.28
UBE3B-210ENST00000539599 OR4K5Q8NGD3 323 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 SETD7Q8WTS6 366 aaKnown RBP13.28□□□□□ -0.28
UBE3B-210ENST00000539599 COX14Q96I36 57 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 AMDHD1Q96NU7 426 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 POLR2J2Q9GZM3 115 aaKnown RBP13.28□□□□□ -0.28
UBE3B-210ENST00000539599 C11orf49Q9H6J7 331 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 TOR4AQ9NXH8 423 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 SPHK1Q9NYA1 384 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 KIF26AQ9ULI4 1882 aaPredicted RBP13.28□□□□□ -0.28
UBE3B-210ENST00000539599 GPR34Q9UPC5 381 aa13.28□□□□□ -0.28
UBE3B-210ENST00000539599 LOC110117498-PIK3R3F6TDL0 507 aa13.27□□□□□ -0.28
UBE3B-210ENST00000539599 HOXC11O43248 304 aaPredicted RBP13.27□□□□□ -0.28
UBE3B-210ENST00000539599 ERI3O43414 337 aaKnown RBP13.27□□□□□ -0.28
UBE3B-210ENST00000539599 FGBP02675 491 aa13.27□□□□□ -0.28
UBE3B-210ENST00000539599 HMGN2P05204 90 aaKnown RBP13.27□□□□□ -0.28
UBE3B-210ENST00000539599 RB1P06400 928 aa13.27□□□□□ -0.28
UBE3B-210ENST00000539599 ALOX5P09917 674 aa13.27□□□□□ -0.28
UBE3B-210ENST00000539599 SLC35G4P0C7Q5 338 aa13.27□□□□□ -0.28
UBE3B-210ENST00000539599 DPTQ07507 201 aa13.27□□□□□ -0.28
UBE3B-210ENST00000539599 GINS1Q14691 196 aa13.27□□□□□ -0.28
UBE3B-210ENST00000539599 SPHARQ15513 63 aa13.27□□□□□ -0.28
UBE3B-210ENST00000539599 METRNLQ641Q3 311 aa13.27□□□□□ -0.28
UBE3B-210ENST00000539599 UNC5DQ6UXZ4 953 aa13.27□□□□□ -0.28
UBE3B-210ENST00000539599 ABI3BPQ7Z7G0 1075 aa13.27□□□□□ -0.28
UBE3B-210ENST00000539599 KIF18BQ86Y91 864 aa13.27□□□□□ -0.28
UBE3B-210ENST00000539599 TMIEQ8NEW7 156 aa13.27□□□□□ -0.28
UBE3B-210ENST00000539599 OR9Q1Q8NGQ5 310 aa13.27□□□□□ -0.28
UBE3B-210ENST00000539599 KAT2AQ92830 837 aa13.27□□□□□ -0.28
UBE3B-210ENST00000539599 UBE2E3Q969T4 207 aa13.27□□□□□ -0.28
UBE3B-210ENST00000539599 LRR1Q96L50 414 aa13.27□□□□□ -0.28
UBE3B-210ENST00000539599 IL23AQ9NPF7 189 aa13.27□□□□□ -0.28
UBE3B-210ENST00000539599 TIGARQ9NQ88 270 aa13.27□□□□□ -0.28
UBE3B-210ENST00000539599 AHSPQ9NZD4 102 aa13.27□□□□□ -0.28
UBE3B-210ENST00000539599 SLC9A3R1O14745 358 aaPredicted RBP13.27□□□□□ -0.29
UBE3B-210ENST00000539599 HAT1O14929 419 aa13.27□□□□□ -0.29
UBE3B-210ENST00000539599 ADAP00813 363 aa13.27□□□□□ -0.29
UBE3B-210ENST00000539599 SEC13P55735 322 aa13.27□□□□□ -0.29
UBE3B-210ENST00000539599 REEP5Q00765 189 aa13.27□□□□□ -0.29
UBE3B-210ENST00000539599 EIF4HQ15056 248 aaKnown RBP13.27□□□□□ -0.29
UBE3B-210ENST00000539599 BAK1Q16611 211 aa13.27□□□□□ -0.29
UBE3B-210ENST00000539599 GPAT3Q53EU6 434 aa13.27□□□□□ -0.29
UBE3B-210ENST00000539599 ATAT1Q5SQI0 421 aa13.27□□□□□ -0.29
UBE3B-210ENST00000539599 OR4C11Q6IEV9 310 aa13.27□□□□□ -0.29
UBE3B-210ENST00000539599 VRK2Q86Y07 508 aa13.27□□□□□ -0.29
UBE3B-210ENST00000539599 ZNF557Q8N988 423 aaPredicted RBP13.27□□□□□ -0.29
UBE3B-210ENST00000539599 OTUB2Q96DC9 234 aa13.27□□□□□ -0.29
UBE3B-210ENST00000539599 CNRIP1Q96F85 164 aaPredicted RBP13.27□□□□□ -0.29
UBE3B-210ENST00000539599 CEP19Q96LK0 163 aa13.27□□□□□ -0.29
UBE3B-210ENST00000539599 RHBGQ9H310 441 aa13.27□□□□□ -0.29
UBE3B-210ENST00000539599 SLC27A6Q9Y2P4 619 aa13.27□□□□□ -0.29
UBE3B-210ENST00000539599 A0A1W2PR48 441 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 LINC01553A4QN01 128 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 CPSF4LA6NMK7 179 aaKnown RBP13.26□□□□□ -0.29
UBE3B-210ENST00000539599 H3BQ06 376 aaPredicted RBP13.26□□□□□ -0.29
UBE3B-210ENST00000539599 VEGFDO43915 354 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 SOX18P35713 384 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 CRYBB2P43320 205 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 MAPK9P45984 424 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 SLAMF1Q13291 335 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 IRF4Q15306 451 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 LRIT3Q3SXY7 679 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 FBXO43Q4G163 708 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 SPANXN2Q5MJ10 180 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 SLX4IPQ5VYV7 408 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 C22orf42Q6IC83 251 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 TMEM145Q8NBT3 493 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 FGF13Q92913 245 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 TM9SF2Q99805 663 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 POLMQ9NP87 494 aaPredicted RBP13.26□□□□□ -0.29
UBE3B-210ENST00000539599 CCDC59Q9P031 241 aaKnown RBP13.26□□□□□ -0.29
UBE3B-210ENST00000539599 TBC1D24Q9ULP9 559 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 DNMT3AQ9Y6K1 912 aaPredicted RBP13.26□□□□□ -0.29
UBE3B-210ENST00000539599 DNAJB6O75190 326 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 GSTT2P0CG29 244 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 GSTT2BP0CG30 244 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 SFSWAPQ12872 951 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms