RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 C8orf33Q9H7E9 229 aaPredicted RBP13.76□□□□□ -0.21
CDCA3-207ENST00000538862 LMAN1LQ9HAT1 526 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 SIAEQ9HAT2 523 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 SIRT3Q9NTG7 399 aaPredicted RBP13.76□□□□□ -0.21
CDCA3-207ENST00000538862 ACSS1Q9NUB1 689 aaPredicted RBP13.76□□□□□ -0.21
CDCA3-207ENST00000538862 QPCTLQ9NXS2 382 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 CRNNQ9UBG3 495 aaPredicted RBP13.76□□□□□ -0.21
CDCA3-207ENST00000538862 TAC3Q9UHF0 121 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 ADAM29Q9UKF5 820 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 PCDHGB6Q9Y5F9 930 aa13.76□□□□□ -0.21
CDCA3-207ENST00000538862 PRRT4C9JH25 899 aa13.75□□□□□ -0.21
CDCA3-207ENST00000538862 HMGN4O00479 90 aa13.75□□□□□ -0.21
CDCA3-207ENST00000538862 SLITRK5O94991 958 aa13.75□□□□□ -0.21
CDCA3-207ENST00000538862 ENDOUP21128 410 aaKnown RBP13.75□□□□□ -0.21
CDCA3-207ENST00000538862 PLA2G5P39877 138 aa13.75□□□□□ -0.21
CDCA3-207ENST00000538862 RPS26P62854 115 aaKnown RBP13.75□□□□□ -0.21
CDCA3-207ENST00000538862 REEP5Q00765 189 aa13.75□□□□□ -0.21
CDCA3-207ENST00000538862 PDGFRLQ15198 375 aa13.75□□□□□ -0.21
CDCA3-207ENST00000538862 SEC23BQ15437 767 aa13.75□□□□□ -0.21
CDCA3-207ENST00000538862 SSX1Q16384 188 aa13.75□□□□□ -0.21
CDCA3-207ENST00000538862 SPDYE7PQ495Y7 208 aa13.75□□□□□ -0.21
CDCA3-207ENST00000538862 C12orf73Q69YU5 71 aa13.75□□□□□ -0.21
CDCA3-207ENST00000538862 FAM180BQ6P0A1 224 aa13.75□□□□□ -0.21
CDCA3-207ENST00000538862 CASP12Q6UXS9 341 aa13.75□□□□□ -0.21
CDCA3-207ENST00000538862 ETFBKMTQ8IXQ9 262 aa13.75□□□□□ -0.21
CDCA3-207ENST00000538862 C2orf73Q8N5S3 287 aaPredicted RBP13.75□□□□□ -0.21
CDCA3-207ENST00000538862 FAM83FQ8NEG4 500 aaPredicted RBP13.75□□□□□ -0.21
CDCA3-207ENST00000538862 OR8J1Q8NGP2 316 aa13.75□□□□□ -0.21
CDCA3-207ENST00000538862 HTRA1Q92743 480 aa13.75□□□□□ -0.21
CDCA3-207ENST00000538862 ATOH1Q92858 354 aaPredicted RBP13.75□□□□□ -0.21
CDCA3-207ENST00000538862 CLDN23Q96B33 292 aa13.75□□□□□ -0.21
CDCA3-207ENST00000538862 EFHD2Q96C19 240 aaPredicted RBP13.75□□□□□ -0.21
CDCA3-207ENST00000538862 TMEM80Q96HE8 168 aa13.75□□□□□ -0.21
CDCA3-207ENST00000538862 NELL2Q99435 816 aa13.75□□□□□ -0.21
CDCA3-207ENST00000538862 KLHL25Q9H0H3 589 aa13.75□□□□□ -0.21
CDCA3-207ENST00000538862 C3orf14Q9HBI5 128 aa13.75□□□□□ -0.21
CDCA3-207ENST00000538862 DYRK4Q9NR20 520 aa13.75□□□□□ -0.21
CDCA3-207ENST00000538862 LSM2Q9Y333 95 aaKnown RBP13.75□□□□□ -0.21
CDCA3-207ENST00000538862 RPL36Q9Y3U8 105 aaKnown RBP13.75□□□□□ -0.21
CDCA3-207ENST00000538862 GPC6Q9Y625 555 aaPredicted RBP13.75□□□□□ -0.21
CDCA3-207ENST00000538862 ZFHX2Q9C0A1 2572 aaPredicted RBP13.74□□□□□ -0.21
CDCA3-207ENST00000538862 RTCAO00442 366 aaKnown RBP13.74□□□□□ -0.21
CDCA3-207ENST00000538862 SH3BP5O60239 455 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 OR10H3O60404 316 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 SEMA7AO75326 666 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 TPPPO94811 219 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 CHRNB1P11230 501 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 GJA4P35212 333 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 SEPHS1P49903 392 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 XKP51811 444 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 DEFA1P59665 94 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 DEFA3P59666 94 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 TRA2BP62995 288 aaKnown RBP13.74□□□□□ -0.21
CDCA3-207ENST00000538862 ALDH6A1Q02252 535 aaKnown RBP13.74□□□□□ -0.21
CDCA3-207ENST00000538862 OCLNQ16625 522 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 ADAMTSL4Q6UY14 1074 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 Q6ZS52 159 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 TRIM69Q86WT6 500 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 NUDT13Q86X67 352 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 KRT73Q86Y46 540 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 CHAC2Q8WUX2 184 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 RAB8BQ92930 207 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 RGMAQ96B86 450 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 OPALINQ96PE5 141 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 IL4I1Q96RQ9 567 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 FUZQ9BT04 418 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 CCDC32Q9BV29 185 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 RSPO3Q9BXY4 272 aaPredicted RBP13.74□□□□□ -0.21
CDCA3-207ENST00000538862 ROGDIQ9GZN7 287 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 ABCG4Q9H172 646 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 SACM1LQ9NTJ5 587 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 TAS2R7Q9NYW3 318 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 DNMT3AQ9Y6K1 912 aaPredicted RBP13.74□□□□□ -0.21
CDCA3-207ENST00000538862 PIEZO1Q92508 2521 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 FAM227AF5H4B4 570 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 SNPHO15079 494 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 B4GALT2O60909 372 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 GPX5O75715 221 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 KCNK2O95069 426 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 DLGAP3O95886 979 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 EIF2S1P05198 315 aaKnown RBP13.74□□□□□ -0.21
CDCA3-207ENST00000538862 ALOX12P18054 663 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 GTF2E2P29084 291 aaKnown RBP13.74□□□□□ -0.21
CDCA3-207ENST00000538862 CCT3P49368 545 aaKnown RBP13.74□□□□□ -0.21
CDCA3-207ENST00000538862 NUBP1P53384 320 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 HSPB3Q12988 150 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 SELENBP1Q13228 472 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 GAS6Q14393 721 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 PGBD2Q6P3X8 592 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 LRRTM4Q86VH4 590 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 HEATR4Q86WZ0 1026 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 C1orf210Q8IVY1 113 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 LINC00471Q8N535 108 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 GALNT6Q8NCL4 622 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 CXorf40AQ8TE69 158 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 POLR2J3Q9H1A7 115 aaKnown RBP13.74□□□□□ -0.21
CDCA3-207ENST00000538862 HHATLQ9HCP6 504 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 LHX9Q9NQ69 397 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 SEMA3GQ9NS98 782 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 CUEDC1Q9NWM3 386 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms