RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 RAB11FIP5Q9BXF6 653 aa23.5■■□□□ 1.35
RAB40C-204ENST00000538492 QRSL1Q9H0R6 528 aaKnown RBP23.5■■□□□ 1.35
RAB40C-204ENST00000538492 CNOT2Q9NZN8 540 aaKnown RBP23.5■■□□□ 1.35
RAB40C-204ENST00000538492 TBC1D3DA0A087WVF3 549 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 TBC1D3IA0A087WXS9 549 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 TBC1D3EA0A087X179 549 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 TBC1D3KA0A087X1G2 549 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 TBC1D3FA6NER0 549 aaPredicted RBP23.49■■□□□ 1.35
RAB40C-204ENST00000538492 TBC1D3LB9A6J9 549 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 LINC01565O15544 149 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 OXSR1O95747 527 aaPredicted RBP23.49■■□□□ 1.35
RAB40C-204ENST00000538492 AIFM1O95831 613 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 CHRM4P08173 479 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 TBC1D3HP0C7X1 549 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 TNNI3P19429 210 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 TEAD1P28347 426 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 FUT5Q11128 374 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 RPE65Q16518 533 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 TSTQ16762 297 aaKnown RBP23.49■■□□□ 1.35
RAB40C-204ENST00000538492 TBC1D3GQ6DHY5 549 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 TBC1D3CQ6IPX1 549 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 TBC1D3Q8IZP1 549 aaPredicted RBP23.49■■□□□ 1.35
RAB40C-204ENST00000538492 SUN3Q8TAQ9 357 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 C16orf58Q96GQ5 468 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 DACH2Q96NX9 599 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 MGLLQ99685 303 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 APOOQ9BUR5 198 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 ACAD8Q9UKU7 415 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 F5P12259 2224 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 METTL15A6NJ78 407 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 K7EQS6 105 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 DSCR3O14972 297 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 PRICKLE3O43900 615 aaPredicted RBP23.49■■□□□ 1.35
RAB40C-204ENST00000538492 CDH3P22223 829 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 ATP5A1P25705 553 aaKnown RBP23.49■■□□□ 1.35
RAB40C-204ENST00000538492 COL9A2Q14055 689 aaPredicted RBP23.49■■□□□ 1.35
RAB40C-204ENST00000538492 PODNL1Q6PEZ8 512 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 IQCF1Q8N6M8 205 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 RNF217Q8TC41 542 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 FGF22Q9HCT0 170 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 POLE4Q9NR33 117 aa23.49■■□□□ 1.35
RAB40C-204ENST00000538492 NME6O75414 186 aaPredicted RBP23.48■■□□□ 1.35
RAB40C-204ENST00000538492 EPPINO95925 133 aa23.48■■□□□ 1.35
RAB40C-204ENST00000538492 BUD31P41223 144 aaPredicted RBP23.48■■□□□ 1.35
RAB40C-204ENST00000538492 KIR2DL1P43626 348 aaPredicted RBP23.48■■□□□ 1.35
RAB40C-204ENST00000538492 KHKP50053 298 aa23.48■■□□□ 1.35
RAB40C-204ENST00000538492 RPS3AP61247 264 aaKnown RBP23.48■■□□□ 1.35
RAB40C-204ENST00000538492 OLR1P78380 273 aa23.48■■□□□ 1.35
RAB40C-204ENST00000538492 RELAQ04206 551 aa23.48■■□□□ 1.35
RAB40C-204ENST00000538492 CASP12Q6UXS9 341 aa23.48■■□□□ 1.35
RAB40C-204ENST00000538492 ZNF367Q7RTV3 350 aa23.48■■□□□ 1.35
RAB40C-204ENST00000538492 OR6T1Q8NGN1 323 aa23.48■■□□□ 1.35
RAB40C-204ENST00000538492 Q96MT0 163 aa23.48■■□□□ 1.35
RAB40C-204ENST00000538492 MMP27Q9H306 513 aa23.48■■□□□ 1.35
RAB40C-204ENST00000538492 PCDHGA3Q9Y5H0 932 aa23.48■■□□□ 1.35
RAB40C-204ENST00000538492 KCNE3Q9Y6H6 103 aa23.48■■□□□ 1.35
RAB40C-204ENST00000538492 SLX4IPQ5VYV7 408 aa23.48■■□□□ 1.35
RAB40C-204ENST00000538492 OR2L5Q8NG80 312 aa23.48■■□□□ 1.35
RAB40C-204ENST00000538492 C9orf43Q8TAL5 461 aaPredicted RBP23.48■■□□□ 1.35
RAB40C-204ENST00000538492 FNDC11Q9BVV2 318 aa23.48■■□□□ 1.35
RAB40C-204ENST00000538492 EQTNQ9NQ60 294 aa23.48■■□□□ 1.35
RAB40C-204ENST00000538492 EYSQ5T1H1 3165 aa23.48■■□□□ 1.35
RAB40C-204ENST00000538492 ISM1B1AKI9 464 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 SLC15A1P46059 708 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 GPAT3Q53EU6 434 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 DGLUCYQ7Z3D6 616 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 TCEANCQ8N8B7 351 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 FCRL4Q96PJ5 515 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 FUZQ9BT04 418 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 SLC25A19Q9HC21 320 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 ZSCAN32Q9NX65 697 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 KRBA1A5PL33 1030 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 PRR19A6NJB7 356 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 PLRG1O43660 514 aaKnown RBP23.47■■□□□ 1.35
RAB40C-204ENST00000538492 ADPRHP54922 357 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 AMER2Q8N7J2 671 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 OR4E2Q8NGC2 313 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 PBX4Q9BYU1 374 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 RMI1Q9H9A7 625 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 APOBEC3BQ9UH17 382 aaKnown RBP23.47■■□□□ 1.35
RAB40C-204ENST00000538492 EML2O95834 649 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 CKMT1AP12532 417 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 MRM1Q6IN84 353 aaKnown RBP23.47■■□□□ 1.35
RAB40C-204ENST00000538492 SYCE2Q6PIF2 218 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 FAM92BQ6ZTR7 304 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 PRR14Q9BWN1 585 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 CDADC1Q9BWV3 514 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 ENTPD4Q9Y227 616 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 SLC9A8Q9Y2E8 581 aa23.47■■□□□ 1.35
RAB40C-204ENST00000538492 CACNB4O00305 520 aaPredicted RBP23.46■■□□□ 1.35
RAB40C-204ENST00000538492 NARSO43776 548 aaKnown RBP23.46■■□□□ 1.35
RAB40C-204ENST00000538492 DNTTP04053 509 aa23.46■■□□□ 1.35
RAB40C-204ENST00000538492 SMIM11AP58511 58 aa23.46■■□□□ 1.35
RAB40C-204ENST00000538492 SNRPGP62308 76 aaKnown RBP23.46■■□□□ 1.35
RAB40C-204ENST00000538492 MEX3DQ86XN8 651 aaKnown RBP23.46■■□□□ 1.35
RAB40C-204ENST00000538492 KBTBD8Q8NFY9 601 aa23.46■■□□□ 1.35
RAB40C-204ENST00000538492 MAN2C1Q9NTJ4 1040 aa23.46■■□□□ 1.35
RAB40C-204ENST00000538492 DZANK1Q9NVP4 752 aa23.46■■□□□ 1.35
RAB40C-204ENST00000538492 CLEC2DQ9UHP7 191 aa23.46■■□□□ 1.35
RAB40C-204ENST00000538492 PCDHGA4Q9Y5G9 962 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms