RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 TEX51A0A1B0GUA7 166 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 IDSB3KWA1 339 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 STMND1H3BQB6 276 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 TM4SF5O14894 197 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SCN2BO60939 215 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ATP1B1P05026 303 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SLC6A2P23975 617 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 RORAP35398 523 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CPOXP36551 454 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 GCGRP47871 477 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 KHKP50053 298 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 KCNJ2P63252 427 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 MRPS35P82673 323 aaKnown RBP9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 HPCAP84074 193 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ZNF155Q12901 538 aaPredicted RBP9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 NKG7Q16617 165 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 MPEG1Q2M385 716 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SPRED3Q2MJR0 410 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.98□□□□□ -0.814e-6■■■□□ 16.5
TNFRSF1A-211ENST00000538363 GCNT6Q5T4J0 391 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 FAM111BQ6SJ93 734 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ASRGL1Q7L266 308 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 TMPRSS7Q7RTY8 843 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 RNF130Q86XS8 419 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 MARCH9Q86YJ5 346 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SLC44A2Q8IWA5 706 aaPredicted RBP9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SLC15A3Q8IY34 581 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 VWA5B2Q8N398 1253 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 OR2T12Q8NG77 320 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 GOT1L1Q8NHS2 421 aaPredicted RBP9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SLC26A7Q8TE54 656 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ADAMTS15Q8TE58 950 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SLC9A6Q92581 669 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 STMN2Q93045 179 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PMEPA1Q969W9 287 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 TMEM125Q96AQ2 219 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CLPTM1LQ96KA5 538 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ZNF681Q96N22 645 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ZNF578Q96N58 590 aaPredicted RBP9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 YIPF4Q9BSR8 244 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 TRIM8Q9BZR9 551 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 OR8D2Q9GZM6 311 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 TGIF2Q9GZN2 237 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 VN1R1Q9GZP7 353 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ALG2Q9H553 416 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 WDR54Q9H977 334 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SLAMF7Q9NQ25 335 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SERHLQ9NQF3 203 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 THSD1Q9NS62 852 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 EXD2Q9NVH0 621 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 THUMPD1Q9NXG2 353 aaKnown RBP9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ACSL6Q9UKU0 697 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 FARSAQ9Y285 508 aaKnown RBP9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PCDHGB3Q9Y5G1 929 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PCDHGA8Q9Y5G5 932 aa9.98□□□□□ -0.81
TNFRSF1A-211ENST00000538363 A0A1W2PS29 197 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PMS2P1A4D2B8 440 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 DUXAA6NLW8 204 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 C9orf172C9J069 976 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 RAD1O60671 282 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 AGR2O95994 175 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ALOX5P09917 674 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CD82P27701 267 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 OTX2P32243 289 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 DLSTP36957 453 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 FRKP42685 505 aaPredicted RBP9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 DSTNP60981 165 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 VAC14Q08AM6 782 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 BNIP2Q12982 314 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 GNA13Q14344 377 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 LASP1Q14847 261 aaKnown RBP9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 EXOSC7Q15024 291 aaKnown RBP9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 NCF4Q15080 339 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ELAVL1Q15717 326 aaKnown RBP9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SPATS1Q496A3 300 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 TRMT12Q53H54 448 aaKnown RBP9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SFT2D3Q587I9 215 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 TNFAIP8L2Q6P589 184 aaPredicted RBP9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ERICH5Q6P6B1 374 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 TMEM64Q6YI46 380 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 COX15Q7KZN9 410 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 C16orf62Q7Z3J2 963 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 HPS6Q86YV9 775 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ENDOVQ8N8Q3 282 aaKnown RBP9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 HIPK4Q8NE63 616 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PLPP5Q8NEB5 264 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 OR52N2Q8NGI0 321 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 OR14A16Q8NHC5 309 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ZFP90Q8TF47 636 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CT55Q8WUE5 264 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 XAGE5Q8WWM1 108 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 FIG4Q92562 907 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 TSLPQ969D9 159 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 FAM162AQ96A26 154 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 LPAR4Q99677 370 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CPPED1Q9BRF8 314 aaPredicted RBP9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 GPATCH1Q9BRR8 931 aaKnown RBP9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 B3GNT4Q9C0J1 378 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 TRIM45Q9H8W5 580 aaPredicted RBP9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 LANCL2Q9NS86 450 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms