RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-208	ENST00000538266	CENPK	Q9BS16	269 aa		4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	ZPBP	Q9BS86	351 aa		4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	BTBD10	Q9BSF8	475 aa		4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	TRMO	Q9BU70	441 aa		4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	MECR	Q9BV79	373 aa		4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	DDA1	Q9BW61	102 aa		4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	TRIM4	Q9C037	500 aa		4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	TWSG1	Q9GZX9	223 aa		4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	CHRNA10	Q9GZZ6	450 aa		4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	C11orf54	Q9H0W9	315 aa	Predicted RBP	4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	ELOVL6	Q9H5J4	265 aa		4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	DENND2D	Q9H6A0	471 aa	Predicted RBP	4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	NOL11	Q9H8H0	719 aa	Known RBP	4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	EML4	Q9HC35	981 aa	Known RBP	4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	FAM60A	Q9NP50	221 aa		4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	MID1IP1	Q9NPA3	183 aa		4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	SLCO1B3	Q9NPD5	702 aa		4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	FBXO8	Q9NRD0	319 aa		4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	OCIAD1	Q9NX40	245 aa		4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	SIDT1	Q9NXL6	827 aa	Known RBP	4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	ETAA1	Q9NY74	926 aa		4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	FAM30A	Q9NZY2	134 aa		4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	SNX6	Q9UNH7	406 aa		4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	POLH	Q9Y253	713 aa		4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	AP1M2	Q9Y6Q5	423 aa		4.08	□□□□□ -1.76
SNHG1-208	ENST00000538266	PCM1	Q15154	2024 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	COL27A1	Q8IZC6	1860 aa	Predicted RBP	4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	KCNE1B	A0A087WTH5	132 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266		A0A088AWK7	358 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	LOC105369274	A0A096LPK9	316 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266		A0A0G2JND7	137 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	LOC102723532	A0A0G2JNH3	316 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	HYKK	A2RU49	373 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	MAGEA13P	A6NCF6	341 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	TRABD2B	A6NFA1	517 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	URAD	A6NGE7	173 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	ENO4	A6NNW6	628 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	TMEM114	B3SHH9	223 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266		C9J4A7	227 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266		H0Y3Z8	333 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266		H0YGG7	62 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266		H0YIV9	168 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	STMND1	H3BQB6	276 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	OR7A17	O14581	309 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	GYG2	O15488	501 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	ZNF749	O43361	778 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	ENTPD5	O75356	428 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	SCRG1	O75711	98 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	KRT36	O76013	467 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	STK17B	O94768	372 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	TGDS	O95455	350 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	PSMG1	O95456	288 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	ESRRB	O95718	433 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	STATH	P02808	62 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	ENO1	P06733	434 aa	Known RBP	4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	BPGM	P07738	259 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	SERPINA6	P08185	405 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	DHRS4L1	P0CG22	281 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	T-ENOL	P0DO92	83 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	FGF5	P12034	268 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	TSPAN8	P19075	237 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	EPOR	P19235	508 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	MAL	P21145	153 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	ZNF10	P21506	573 aa	Predicted RBP	4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	CD82	P27701	267 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	SLC5A2	P31639	672 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	SERPINB5	P36952	375 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	ETV5	P41161	510 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	PIK3CB	P42338	1070 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	RAP1GDS1	P52306	607 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	CHN2	P52757	468 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	ARFIP2	P53365	341 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	ARSF	P54793	590 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	ERVPABLB-1	P60509	514 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	ARF3	P61204	181 aa	Predicted RBP	4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	STXBP1	P61764	594 aa	Known RBP	4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	SHC2	P98077	582 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	DGCR2	P98153	550 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	STX3	Q13277	289 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	DDX39B	Q13838	428 aa	Known RBP	4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	KPNB1	Q14974	876 aa	Known RBP	4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	HERC3	Q15034	1050 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	TRMT5	Q32P41	509 aa	Known RBP	4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	GGTA1P	Q4G0N0	100 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	DNAL1	Q4LDG9	190 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	UNC50	Q53HI1	259 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	SGO1	Q5FBB7	561 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	MANEA	Q5SRI9	462 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	LCE1D	Q5T752	114 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	GARNL3	Q5VVW2	1013 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	FRG2	Q64ET8	278 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	ATG16L1	Q676U5	607 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	FRMPD2B	Q6IN97	320 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	PWWP2B	Q6NUJ5	590 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	NIPAL1	Q6NVV3	410 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	TRIM40	Q6P9F5	258 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	ZCCHC23	Q6ZST2	131 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	RPS27L	Q71UM5	84 aa	Known RBP	4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	ABHD13	Q7L211	337 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	ASPG	Q86U10	573 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms