RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 ZNF729A6NN14 1252 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 JCHAINP01591 159 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 SYPL2Q5VXT5 272 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 KCTD11Q693B1 232 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 LAPTM4BQ86VI4 370 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 SPPL3Q8TCT6 385 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 EPYCQ99645 322 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 CMSS1Q9BQ75 279 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 OSGEPL1Q9H4B0 414 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 HEBP1Q9NRV9 189 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 PLEKHB1Q9UF11 243 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 TEX46H3BTG2 121 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 H2AFB2P0C5Z0 115 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 G6PDP11413 515 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 GABRB1P18505 474 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 WARSP23381 471 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 CCR1P32246 355 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 CRYBB2P43320 205 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 ZFP36L2P47974 494 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 KCNJ3P48549 501 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 ABHD18Q0P651 414 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 TWF1Q12792 350 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 PON3Q15166 354 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 HACD4Q5VWC8 232 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 LIPKQ5VXJ0 399 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 FAM219BQ5XKK7 198 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 LCLAT1Q6UWP7 414 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 PYROXD2Q8N2H3 581 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 GLYATL2Q8WU03 294 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 PIH1D2Q8WWB5 315 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 IRF7Q92985 503 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 SUSD3Q96L08 255 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 B3GNT5Q9BYG0 378 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 CHIAQ9BZP6 476 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 SAP130Q9H0E3 1048 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 PLEKHA6Q9Y2H5 1048 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 C17orf113A0A1B0GUU1 675 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 TNFRSF11BO00300 401 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 GADD45GO95257 159 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 H2AFB1P0C5Y9 115 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 TNFRSF17Q02223 184 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 MLLT11Q13015 90 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 SMAD4Q13485 552 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 PAFAH1B3Q15102 231 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 MEDAGQ5VYS4 303 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 Q6ZPB1 254 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 TSPAN33Q86UF1 283 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 ZNF461Q8TAF7 563 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 STAG3L4Q8TBR4 150 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 WNT8BQ93098 351 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 MRPS24Q96EL2 167 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 WBP1Q96G27 269 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 METTL17Q9H7H0 456 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 ENAMQ9NRM1 1142 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 TRPS1Q9UHF7 1281 aa10.35□□□□□ -0.75
CLSTN3-207ENST00000537408 POP7O75817 140 aaKnown RBP10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 MT-CYBP00156 380 aaPredicted RBP10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 SPP1P10451 314 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 KCNE1P15382 129 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 PPP3CBP16298 524 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 GEMP55040 296 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 NRG1Q02297 640 aaPredicted RBP10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 CRTC2Q53ET0 693 aaPredicted RBP10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 C3orf38Q5JPI3 329 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 B3GNTL1Q67FW5 361 aaPredicted RBP10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 ZNF730Q6ZMV8 503 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 ZNF280BQ86YH2 543 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 PHACTR4Q8IZ21 702 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 OR10G2Q8NGC3 310 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 TCTEX1D2Q8WW35 142 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 TRMT61BQ9BVS5 477 aaKnown RBP10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 GSDMCQ9BYG8 508 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 PPP1R3EQ9H7J1 279 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 B3GAT2Q9NPZ5 323 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 MARK1Q9P0L2 795 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 NFKBIL1Q9UBC1 381 aaPredicted RBP10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 GPR160Q9UJ42 338 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 J3KR12 359 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 RGS11O94810 467 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 CXCL3P19876 107 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 ATP5C1P36542 298 aaKnown RBP10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 ARFIP1P53367 373 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 FAM174BQ3ZCQ3 159 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 XKR7Q5GH72 579 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 FRMPD2BQ6IN97 320 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 IL27RAQ6UWB1 636 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 LRRN1Q6UXK5 716 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 NAXDQ8IW45 347 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 LIX1Q8N485 282 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 ADAMTS14Q8WXS8 1223 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 KLHL5Q96PQ7 755 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 OR52E6Q96RD3 313 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 BCO2Q9BYV7 579 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 YBX2Q9Y2T7 364 aaKnown RBP10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 PTPRZ1P23471 2315 aaPredicted RBP10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 A0A1B0GWJ7 208 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 C1orf196B1AJZ1 125 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 ZNF879B4DU55 563 aa10.34□□□□□ -0.75
CLSTN3-207ENST00000537408 F5H5T6 163 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms