RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 MRPS35P82673 323 aaKnown RBP12.15□□□□□ -0.46
PRKDC-206ENST00000536429 ZNF791Q3KP31 576 aaPredicted RBP12.15□□□□□ -0.46
PRKDC-206ENST00000536429 TRMT12Q53H54 448 aaKnown RBP12.15□□□□□ -0.46
PRKDC-206ENST00000536429 FAM71E1Q6IPT2 247 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 NOXRED1Q6NXP6 359 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 SLC29A4Q7RTT9 530 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 FGD2Q7Z6J4 655 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 CHERPQ8IWX8 916 aaKnown RBP12.15□□□□□ -0.46
PRKDC-206ENST00000536429 CCDC116Q8IYX3 515 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 LRRC25Q8N386 305 aaPredicted RBP12.15□□□□□ -0.46
PRKDC-206ENST00000536429 VWA5B2Q8N398 1253 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 FAM98AQ8NCA5 519 aaKnown RBP12.15□□□□□ -0.46
PRKDC-206ENST00000536429 OR9A2Q8NGT5 310 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 C16orf52Q8NHV5 167 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 ADIPOR1Q96A54 375 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 EGLN2Q96KS0 407 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 ZNF395Q9H8N7 513 aaPredicted RBP12.15□□□□□ -0.46
PRKDC-206ENST00000536429 SH2D2AQ9NP31 389 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 TIMMDC1Q9NPL8 285 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 RRAGDQ9NQL2 400 aaPredicted RBP12.15□□□□□ -0.46
PRKDC-206ENST00000536429 SENP1Q9P0U3 644 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 GIMAP2Q9UG22 337 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 ZNF639Q9UID6 485 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 ZDHHC2Q9UIJ5 367 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 SLC5A6Q9Y289 635 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 TRAF6Q9Y4K3 522 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 C2orf92A0A1B0GVN3 265 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 CYSRT1A8MQ03 144 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 PIP5K1BO14986 540 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 CTIFO43310 598 aaKnown RBP12.14□□□□□ -0.47
PRKDC-206ENST00000536429 ITM2AO43736 263 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 HS6ST1O60243 411 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 LYPLA1O75608 230 aaPredicted RBP12.14□□□□□ -0.47
PRKDC-206ENST00000536429 LRATO95237 230 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 TUBBP07437 444 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 STSP08842 583 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 FBXO45P0C2W1 286 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 DDCP20711 480 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 PRPH2P23942 346 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 SERPINB4P48594 390 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 ZNF763Q0D2J5 394 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 C2orf80Q0P641 193 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 MAP4K2Q12851 820 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 NNATQ16517 81 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 ZNF628Q5EBL2 1059 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 SH2D4BQ5SQS7 431 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 BEND6Q5SZJ8 279 aaPredicted RBP12.14□□□□□ -0.47
PRKDC-206ENST00000536429 OPN5Q6U736 354 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 RTL4Q6ZR62 310 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 TICAM1Q8IUC6 712 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 PRR22Q8IZ63 422 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 ZFP62Q8NB50 900 aaPredicted RBP12.14□□□□□ -0.47
PRKDC-206ENST00000536429 OR2M7Q8NG81 312 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 OR10G3Q8NGC4 313 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 OR52R1Q8NGF1 315 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 OR5M3Q8NGP4 307 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 SSC4DQ8WTU2 575 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 TWIST2Q8WVJ9 160 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 KAT2AQ92830 837 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 CTHRC1Q96CG8 243 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 SPACA9Q96E40 222 aaPredicted RBP12.14□□□□□ -0.47
PRKDC-206ENST00000536429 FCRL1Q96LA6 429 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 ITPAQ9BY32 194 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 LRTM1Q9HBL6 345 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 PFDN4Q9NQP4 134 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 SLC35C2Q9NQQ7 365 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.14□□□□□ -0.47
PRKDC-206ENST00000536429 SH3BGRL2Q9UJC5 107 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 PSME2Q9UL46 239 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 ZNF780BQ9Y6R6 833 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 ICE1Q9Y2F5 2266 aa12.14□□□□□ -0.47
PRKDC-206ENST00000536429 WIPF3A6NGB9 483 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 FAM166BA8MTA8 275 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 NPIPB8E9PQR5 432 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 KLRC4-KLRK1H3BQV0 150 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 SLC28A1O00337 649 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 LSM1O15116 133 aaKnown RBP12.13□□□□□ -0.47
PRKDC-206ENST00000536429 ASNA1O43681 348 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 SEC22BO75396 215 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 FGF4P08620 206 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 DHRS4L1P0CG22 281 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 GPX3P22352 226 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 PIGAP37287 484 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 DNASE1L1P49184 302 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 FOXO1Q12778 655 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 HEPACAMQ14CZ8 416 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 CEBPEQ15744 281 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 RFTN2Q52LD8 501 aaPredicted RBP12.13□□□□□ -0.47
PRKDC-206ENST00000536429 C4orf17Q53FE4 359 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 CMPK2Q5EBM0 449 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 PRAMEF20Q5VT98 475 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 HIST2H2BCQ6DN03 193 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 DESI1Q6ICB0 168 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 ANKRD26P1Q6NSI1 321 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 LRIG3Q6UXM1 1119 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 RNF165Q6ZSG1 346 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 FJX1Q86VR8 437 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 DDIASQ8IXT1 998 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 CLYBLQ8N0X4 340 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 GOLM1Q8NBJ4 401 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms